| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is pstA
Identifier: 115351232
GI number: 115351232
Start: 1290554
End: 1291447
Strand: Direct
Name: pstA
Synonym: Bamb_1179
Alternate gene names: 115351232
Gene position: 1290554-1291447 (Clockwise)
Preceding gene: 115351231
Following gene: 115351233
Centisome position: 36.29
GC content: 65.66
Gene sequence:
>894_bases ATGAGCGAGCCCATCATGAATTTCCCCGGGCCGAACGGCGCCGCGCTCGACGCGATGCGCAACCGCCTGCAACGCAGGCG CAAGTTCACCAACGCGATCGCGCTCACCGCGTCGCTCGGCGCGATGGCGTTCGGGCTGCTGTGGCTCGTGTGGATTCTCT ACACGACCGTGCACCTCGGCGTCGGCGGCCTGTCGCTGCAGTTGTTCACCGAATCGACGCCGGCGCCGAACACGGAAGGC GGCGGTCTGGCGAACGCGATCGTCGGCAGCCTGCTGCTGTGCGGTTTCGGCACGCTGGTCGGCACGCCGATCGGCATCCT CGCGGGCGTCTATCTCGCCGAATACGGCCAGAAGAACCTGCTGGCGAGCACGATCCGCTTCATCAACGACATCCTGCTGT CGGCGCCGTCGATCGTCATCGGCCTGTTCGTGTACGCGATCGTCGTCGCGAAGTCGGGACGCTTCTCGGGCTGGGCCGGC GTGATTGCGCTCGCGCTGCTGCAGATTCCGATCGTGATCCGCACGACCGAGAACATGCTGAAGCTCGTGCCGAACGCACT GCGTGAAGCGGCCGTCGCGCTCGGCACGCCGAAGTGGCGCATGGTGCTGAAGATCACGCTGCGCGCATCGGTCGGCGGGA TCGTGACGGGCGTGTTGCTCGCGATCGCGCGGATCGCCGGCGAAACGGCGCCGCTGCTGTTCACGGCGCTGTCGAACCAG TTCTTCTCGTGGGACATGAGCCAGCCGATGGCGAACCTGCCCGTCACGATCTACAAGTTCGCGATGAGCCCGTTCGCCGA ATGGCAGTCGCTCGCATGGGCGGGCGTGTTCCTGATTACGCTCGGGGTGCTCGGACTCAACGTCCTGGCGCGCTCGATCT TCTCGAAAAAGTAA
Upstream 100 bases:
>100_bases CGCTGATGGAACTGGGCCTGATCCTGTTCGTGATCACGTTCATCGTGCTGTCCGTCTCCAAACTGCTGCTGCTTCGTCTC GAGAAGGGAGAGGGCAAGAA
Downstream 100 bases:
>100_bases CGGCGGAGCGATCCGATGAATATGGCAGAAAGCCACCTGAATTCCGTCGAGCGCACCGCTGCGCCCGCCGGCACGCACGA CGCGGTGCATGGCAGCCCGC
Product: phosphate transporter permease subunit PtsA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSEPIMNFPGPNGAALDAMRNRLQRRRKFTNAIALTASLGAMAFGLLWLVWILYTTVHLGVGGLSLQLFTESTPAPNTEG GGLANAIVGSLLLCGFGTLVGTPIGILAGVYLAEYGQKNLLASTIRFINDILLSAPSIVIGLFVYAIVVAKSGRFSGWAG VIALALLQIPIVIRTTENMLKLVPNALREAAVALGTPKWRMVLKITLRASVGGIVTGVLLAIARIAGETAPLLFTALSNQ FFSWDMSQPMANLPVTIYKFAMSPFAEWQSLAWAGVFLITLGVLGLNVLARSIFSKK
Sequences:
>Translated_297_residues MSEPIMNFPGPNGAALDAMRNRLQRRRKFTNAIALTASLGAMAFGLLWLVWILYTTVHLGVGGLSLQLFTESTPAPNTEG GGLANAIVGSLLLCGFGTLVGTPIGILAGVYLAEYGQKNLLASTIRFINDILLSAPSIVIGLFVYAIVVAKSGRFSGWAG VIALALLQIPIVIRTTENMLKLVPNALREAAVALGTPKWRMVLKITLRASVGGIVTGVLLAIARIAGETAPLLFTALSNQ FFSWDMSQPMANLPVTIYKFAMSPFAEWQSLAWAGVFLITLGVLGLNVLARSIFSKK >Mature_296_residues SEPIMNFPGPNGAALDAMRNRLQRRRKFTNAIALTASLGAMAFGLLWLVWILYTTVHLGVGGLSLQLFTESTPAPNTEGG GLANAIVGSLLLCGFGTLVGTPIGILAGVYLAEYGQKNLLASTIRFINDILLSAPSIVIGLFVYAIVVAKSGRFSGWAGV IALALLQIPIVIRTTENMLKLVPNALREAAVALGTPKWRMVLKITLRASVGGIVTGVLLAIARIAGETAPLLFTALSNQF FSWDMSQPMANLPVTIYKFAMSPFAEWQSLAWAGVFLITLGVLGLNVLARSIFSKK
Specific function: Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=284, Percent_Identity=72.5352112676056, Blast_Score=409, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31646; Mature: 31515
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: PS00962 RIBOSOMAL_S2_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPIMNFPGPNGAALDAMRNRLQRRRKFTNAIALTASLGAMAFGLLWLVWILYTTVHLG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGLSLQLFTESTPAPNTEGGGLANAIVGSLLLCGFGTLVGTPIGILAGVYLAEYGQKNL CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHH LASTIRFINDILLSAPSIVIGLFVYAIVVAKSGRFSGWAGVIALALLQIPIVIRTTENML HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECHHHHH KLVPNALREAAVALGTPKWRMVLKITLRASVGGIVTGVLLAIARIAGETAPLLFTALSNQ HHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFSWDMSQPMANLPVTIYKFAMSPFAEWQSLAWAGVFLITLGVLGLNVLARSIFSKK HHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEPIMNFPGPNGAALDAMRNRLQRRRKFTNAIALTASLGAMAFGLLWLVWILYTTVHLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VGGLSLQLFTESTPAPNTEGGGLANAIVGSLLLCGFGTLVGTPIGILAGVYLAEYGQKNL CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHH LASTIRFINDILLSAPSIVIGLFVYAIVVAKSGRFSGWAGVIALALLQIPIVIRTTENML HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECHHHHH KLVPNALREAAVALGTPKWRMVLKITLRASVGGIVTGVLLAIARIAGETAPLLFTALSNQ HHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FFSWDMSQPMANLPVTIYKFAMSPFAEWQSLAWAGVFLITLGVLGLNVLARSIFSKK HHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2993631; 3881386; 7686882; 9278503; 1447208 [H]