Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351208

Identifier: 115351208

GI number: 115351208

Start: 1263717

End: 1264454

Strand: Direct

Name: 115351208

Synonym: Bamb_1155

Alternate gene names: NA

Gene position: 1263717-1264454 (Clockwise)

Preceding gene: 115351207

Following gene: 115351210

Centisome position: 35.53

GC content: 72.22

Gene sequence:

>738_bases
ATGAACCATGCTCGTTGGACAGGCGCCGGCGCGGGTCTCGCGCATGCGGCGCCACGCAGGGAGCCGATCGTGACCGAGTG
TTTTGCCGATCGCGCCGACGCGGGTCGCCGGCTTGCGGACGCGCTGCACGACTATGCGGGGCGTCGCGACGTCGTCGTGC
TCGCGCTGCCGCGCGGCGGCGTGCCGGTGGCATACCAGGTCGCGCTGGCGCTGCACGCGCCGCTCGACGTGCTGATCGTG
CGCAAGCTCGGCATGCCGTCCGATCCCGAATTCGCGATCGGCGCGATCGCGACCGGCGGGGTGATCCACCTGCAACACGC
GGCGATTCGCGCGATGGGCGTGACCGATGGCCAGCTGGCCGACGTGATCGCGCGCGAAACCGTCGAACTGGAGCGCCGCG
ACGCGCTGTATCGCGGCGGCCGGTCGCCGCTGCCGGTCGACGGCCGCATCGCGATCGTCGTCGACGACGGCGTCGCGACC
GGCGCATCGATGCGCGTCGCGCTGCAGGCGCTGCGCGAGCGCCATCCCGCGCGCATCGTGGCCGCCGCACCGGTTGCGCC
GGCGGGCGCGCGGCACGTGTTCGACGGTCTGGCCGACGCGTTCGTGACGGTGTCGCAGCCGTACCTGTTCTTCGGGATCA
GCCAGTTCTACGCGCGTTTCGACCAGACCGGGGACGACGAGGTGCGTGCGCTGCTCGAGGCGTCCCGCGCGCAGGACGAC
GACATCACGTCCGTCTGA

Upstream 100 bases:

>100_bases
GCCCGGGCGAACTCCACCGTCTCTTTCCGCGCGGCCACCCCCAAACCGCAATCCGCACGCATTCCACGCCGGTGTGACCC
CGCTTGCATCGGCGCGTCCG

Downstream 100 bases:

>100_bases
CCCGGCGCCGGCGCGCTGCCGGGCGAGCGGCTTCCGCCTGCGCGAACACCCGCTGCAGCGCCGGATGAACGTCGCCGCGC
CAGCGGTCGCCCGTGAACAG

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV
RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT
GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD
DITSV

Sequences:

>Translated_245_residues
MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV
RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT
GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD
DITSV
>Mature_245_residues
MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGGVPVAYQVALALHAPLDVLIV
RKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLADVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVAT
GASMRVALQALRERHPARIVAAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD
DITSV

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007815
- InterPro:   IPR000836 [H]

Pfam domain/function: PF05139 Erythro_esteras; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 26051; Mature: 26051

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGG
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
VPVAYQVALALHAPLDVLIVRKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLA
CCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHHHHEECCCCCHHH
DVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVATGASMRVALQALRERHPARIV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
AAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD
EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
DITSV
CCCCC
>Mature Secondary Structure
MNHARWTGAGAGLAHAAPRREPIVTECFADRADAGRRLADALHDYAGRRDVVVLALPRGG
CCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
VPVAYQVALALHAPLDVLIVRKLGMPSDPEFAIGAIATGGVIHLQHAAIRAMGVTDGQLA
CCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEEECCCEEEEHHHHHHEECCCCCHHH
DVIARETVELERRDALYRGGRSPLPVDGRIAIVVDDGVATGASMRVALQALRERHPARIV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
AAAPVAPAGARHVFDGLADAFVTVSQPYLFFGISQFYARFDQTGDDEVRALLEASRAQDD
EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
DITSV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]