| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yibF [C]
Identifier: 115351210
GI number: 115351210
Start: 1265848
End: 1266477
Strand: Direct
Name: yibF [C]
Synonym: Bamb_1157
Alternate gene names: 115351210
Gene position: 1265848-1266477 (Clockwise)
Preceding gene: 115351208
Following gene: 115351211
Centisome position: 35.59
GC content: 70.16
Gene sequence:
>630_bases ATGAAGCTGATCGGCATGCTGGATTCCCCGTTCGTGCGCCGTGTCGCCATATCGGCGAGGCTGCTCGACCTGCCGTTCGA ACACGAGTCGGTGTCGGTGTTCCGCCACTTCGACCGGTTCCGGACGTTCAGCCCGGTCGTGAAGGCACCGACGCTCGTGA CCGACGACGGCACGACGCTGATCGATTCGTCGCTGATCGTCGACTACCTCGACCATCGCGTCGCGCCGGAGCGGCGCCTG CTGCCCGACGCCGCCGACGCGCGGCTGCGCGCGCTCGTGCCGGTCGGTTTCGCGCTGGCGGCGGCCGAGAAGACGGTGCA GGTCGTGTACGAGCAGGCGCTGCGGCCGGCCGACAAGCAGCACGCGCCGTGGCTCGAGCGCGTGCTGAGCCAACTCGAGG CCGCATACGGCGAACTCGAGCCGGTGGTCGCGGCCGCGAACGGCTGGCTCGGCGGCGCGCGCCTGCTGCAGTCGGACGTG ACCGTCGCCGTCGCATGGCGTTTCACGCAGTTCATGACCGCCGATTACCCGGCGCTCGCGCGGATCGATCCGGCCCGTTA TCCGGCGCTCGCCGCGCATTCGGCGCGTGCGGAATTGCTGCCGGCGTTCGTCGAGACGCCGCTCCACTGA
Upstream 100 bases:
>100_bases TGACGTGGATCAAGCATGCAGCGGGCATGCGTCGCGCTAGGCGGCGGCGCACGGCGCTGCTACAGTCGTCGCTCCCATTC CCCTCAAGCGGAGCGTTGCA
Downstream 100 bases:
>100_bases AGCCGGCGTCGCTCGCGGCGGGCGGCGGCGGATCGAGGGGGCGGGGCGCGACCGGCGTGCGTGGGGCTGCATCGGGACCC GGGCCGGCGTCCGGCGCGGC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain Protein; Glutathione Transferase; Glutathione S-Transferase-Like; Glutathione S-Transferase Related Protein; Glutathione S-Transferase Like Protein; Glutathione S-Transferase Family Protein; S-Transferase; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKLIGMLDSPFVRRVAISARLLDLPFEHESVSVFRHFDRFRTFSPVVKAPTLVTDDGTTLIDSSLIVDYLDHRVAPERRL LPDAADARLRALVPVGFALAAAEKTVQVVYEQALRPADKQHAPWLERVLSQLEAAYGELEPVVAAANGWLGGARLLQSDV TVAVAWRFTQFMTADYPALARIDPARYPALAAHSARAELLPAFVETPLH
Sequences:
>Translated_209_residues MKLIGMLDSPFVRRVAISARLLDLPFEHESVSVFRHFDRFRTFSPVVKAPTLVTDDGTTLIDSSLIVDYLDHRVAPERRL LPDAADARLRALVPVGFALAAAEKTVQVVYEQALRPADKQHAPWLERVLSQLEAAYGELEPVVAAANGWLGGARLLQSDV TVAVAWRFTQFMTADYPALARIDPARYPALAAHSARAELLPAFVETPLH >Mature_209_residues MKLIGMLDSPFVRRVAISARLLDLPFEHESVSVFRHFDRFRTFSPVVKAPTLVTDDGTTLIDSSLIVDYLDHRVAPERRL LPDAADARLRALVPVGFALAAAEKTVQVVYEQALRPADKQHAPWLERVLSQLEAAYGELEPVVAAANGWLGGARLLQSDV TVAVAWRFTQFMTADYPALARIDPARYPALAAHSARAELLPAFVETPLH
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23106; Mature: 23106
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIGMLDSPFVRRVAISARLLDLPFEHESVSVFRHFDRFRTFSPVVKAPTLVTDDGTTL CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCH IDSSLIVDYLDHRVAPERRLLPDAADARLRALVPVGFALAAAEKTVQVVYEQALRPADKQ HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HAPWLERVLSQLEAAYGELEPVVAAANGWLGGARLLQSDVTVAVAWRFTQFMTADYPALA CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCEEEEHHHHHHHHHCCCCCHH RIDPARYPALAAHSARAELLPAFVETPLH CCCCHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKLIGMLDSPFVRRVAISARLLDLPFEHESVSVFRHFDRFRTFSPVVKAPTLVTDDGTTL CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHCCCEEEECCCCCH IDSSLIVDYLDHRVAPERRLLPDAADARLRALVPVGFALAAAEKTVQVVYEQALRPADKQ HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC HAPWLERVLSQLEAAYGELEPVVAAANGWLGGARLLQSDVTVAVAWRFTQFMTADYPALA CCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCEEEEHHHHHHHHHCCCCCHH RIDPARYPALAAHSARAELLPAFVETPLH CCCCHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA