Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is mdcG [H]

Identifier: 115351204

GI number: 115351204

Start: 1260474

End: 1261142

Strand: Direct

Name: mdcG [H]

Synonym: Bamb_1151

Alternate gene names: 115351204

Gene position: 1260474-1261142 (Clockwise)

Preceding gene: 115351203

Following gene: 115351205

Centisome position: 35.44

GC content: 74.74

Gene sequence:

>669_bases
GTGCCGCACGCTGACACACCGCTGCGCCGCCACACGCTCGTCACGCTGACGGCGGCCGGGTGGCGCGCGGCATGCGCGCG
CGATCCCGCGCTGGCCGCAGATCCGCTCGTGCAGGCGTGGGCCGCGCACGGCCGGCCGCTGATCGTGCGCCGCGCGTCGC
CCGACGAGGCCGACGCGGGTCGCATTCCGCTCGGCTTGCCGCTGCCGCCTTCCGCGGGCAAGCGGCGCATCGCGCTGAGC
GTCGCCGCCGACGCGGTGGCGGCGGTCGGCCCGCTGCCTGCGCTGGCCGACGTGCTCGCCGTCGCGCCCGATGCATGGCA
CGCGACATTGCGCGAGCTGGACGCGCTCGGCGCGCGCTGCGGCGTGCCGGGCCGCGTGTTCGGCAGCCTCGCGTGGCAGG
CGCTGACGGGCGAGTGCTACCTGAGCGCGTCCTCCGATCTCGATATCGTGTTTCCGCTGCCGGCCGCCGCGTCGCTCGCC
GCGTTGCTCGACGGCCTGGCGGCGCTCGATGCGCGCGCGCCGATGCGCATCGACGGCGAACTGCTGCGCGACGACGGCGC
TGGCGTGAACTGGCGCGAATTGCATGCGCGGCTGCCTGAAGTCGCGGTCAAGACGGCGATCGCCGTCGAATTGATGTCTG
CCGATGCATTCACGGGAGGCGCGCGATGA

Upstream 100 bases:

>100_bases
GGTGAATGGCTCGGCAGGCCGGCCGATCGCGGCGACGGTCGTGCGGCGCGCGGCCGGCCGGTCGCGGCCGACGTCGCGCG
ACGCGTCGAGGCACTCGCGC

Downstream 100 bases:

>100_bases
GTGCCGGAGCCGCTCGCCGCGCAACGGCGCCGTCCGACGCCGAGCGCATCGCCGCACTGGCCGAGCACAGCCTCGTGCTC
GAAATCGACACGTATCCGAA

Product: phosphoribosyl-dephospho-CoA transferase

Products: NA

Alternate protein names: Malonate decarboxylase holo-[acyl-carrier-protein] synthase; Holo-ACP synthase [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPHADTPLRRHTLVTLTAAGWRAACARDPALAADPLVQAWAAHGRPLIVRRASPDEADAGRIPLGLPLPPSAGKRRIALS
VAADAVAAVGPLPALADVLAVAPDAWHATLRELDALGARCGVPGRVFGSLAWQALTGECYLSASSDLDIVFPLPAAASLA
ALLDGLAALDARAPMRIDGELLRDDGAGVNWRELHARLPEVAVKTAIAVELMSADAFTGGAR

Sequences:

>Translated_222_residues
MPHADTPLRRHTLVTLTAAGWRAACARDPALAADPLVQAWAAHGRPLIVRRASPDEADAGRIPLGLPLPPSAGKRRIALS
VAADAVAAVGPLPALADVLAVAPDAWHATLRELDALGARCGVPGRVFGSLAWQALTGECYLSASSDLDIVFPLPAAASLA
ALLDGLAALDARAPMRIDGELLRDDGAGVNWRELHARLPEVAVKTAIAVELMSADAFTGGAR
>Mature_221_residues
PHADTPLRRHTLVTLTAAGWRAACARDPALAADPLVQAWAAHGRPLIVRRASPDEADAGRIPLGLPLPPSAGKRRIALSV
AADAVAAVGPLPALADVLAVAPDAWHATLRELDALGARCGVPGRVFGSLAWQALTGECYLSASSDLDIVFPLPAAASLAA
LLDGLAALDARAPMRIDGELLRDDGAGVNWRELHARLPEVAVKTAIAVELMSADAFTGGAR

Specific function: Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme- A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein] [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mdcG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017557 [H]

Pfam domain/function: PF10620 MdcG [H]

EC number: =2.7.7.66 [H]

Molecular weight: Translated: 22936; Mature: 22804

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00139 THIOL_PROTEASE_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHADTPLRRHTLVTLTAAGWRAACARDPALAADPLVQAWAAHGRPLIVRRASPDEADAG
CCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
RIPLGLPLPPSAGKRRIALSVAADAVAAVGPLPALADVLAVAPDAWHATLRELDALGARC
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GVPGRVFGSLAWQALTGECYLSASSDLDIVFPLPAAASLAALLDGLAALDARAPMRIDGE
CCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEECCE
LLRDDGAGVNWRELHARLPEVAVKTAIAVELMSADAFTGGAR
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PHADTPLRRHTLVTLTAAGWRAACARDPALAADPLVQAWAAHGRPLIVRRASPDEADAG
CCCCCCCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
RIPLGLPLPPSAGKRRIALSVAADAVAAVGPLPALADVLAVAPDAWHATLRELDALGARC
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GVPGRVFGSLAWQALTGECYLSASSDLDIVFPLPAAASLAALLDGLAALDARAPMRIDGE
CCCHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEECCE
LLRDDGAGVNWRELHARLPEVAVKTAIAVELMSADAFTGGAR
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]