Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351203

Identifier: 115351203

GI number: 115351203

Start: 1259780

End: 1260487

Strand: Direct

Name: 115351203

Synonym: Bamb_1150

Alternate gene names: NA

Gene position: 1259780-1260487 (Clockwise)

Preceding gene: 115351202

Following gene: 115351204

Centisome position: 35.42

GC content: 70.62

Gene sequence:

>708_bases
ATGACGCTCGATGAAGTCCTGACCTCGCTGTTTCCCAAAGGCCATTCGATTACGCGCAGCGGCGGCCTGCTGACGGGCCA
CGCGCTGCTGACCGGCACGCGCGTCGACGTGATTGGCGTTTCCGAGCGCTTGCCGTTCGGCATCGACGAAGCGCTGACGC
TCGCGTCGCACGTGCTCGACACGATCGAGCGCGGCGGCGACACGCCGATTCTCGTGCTCGTCGACAGCGACAGCCAGCGG
ATGAGCAAGCGCGACGAACTGCTCGGCCTGAACGAAGGGCTGTCGCATCTCGCGAAATGCCTGATGCAGGCGGAGCTCGC
CGGGCACCGCACGATCGGCGTGCTGTACGGCCATACGGCCGCGGGTGCGTTCATCGCGACCGCGCTCGCGACGCGTACGC
TGCTCGCGGTGCCGGGCGCCGAGCCGGAGGTGATGGACCTGCCGTCGATGTCGCGCGTGACGAAGCTGCCGATCGACGTG
CTGAAGGAGATGGCGCGCGCGACGCCGGTGTTCGCGCCGGGGCTCGACAATCTCGTGAAGATGGGCGCCGTCGACGCCGT
GCTCGATCCGGGCCGCGCGCTCGACGCGCAGGTCGGTGAATGGCTCGGCAGGCCGGCCGATCGCGGCGACGGTCGTGCGG
CGCGCGGCCGGCCGGTCGCGGCCGACGTCGCGCGACGCGTCGAGGCACTCGCGCGTGCCGCACGCTGA

Upstream 100 bases:

>100_bases
GATGTGTGGCGCGCGCTCGGCGCGGACACGCCGGAAGCGATCCCCGGGATGCCCGACGACGAATTCGCGAAGCTCGCCGA
CCAACTGCAGGAGCCGCAGC

Downstream 100 bases:

>100_bases
CACACCGCTGCGCCGCCACACGCTCGTCACGCTGACGGCGGCCGGGTGGCGCGCGGCATGCGCGCGCGATCCCGCGCTGG
CCGCAGATCCGCTCGTGCAG

Product: malonate decarboxylase subunit gamma

Products: NA

Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Subunit MdcE; Malonate Decarboxylase Gamma-Subunit; Malonate Decarboxylase Gamma-Subunit MdcE

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTLDEVLTSLFPKGHSITRSGGLLTGHALLTGTRVDVIGVSERLPFGIDEALTLASHVLDTIERGGDTPILVLVDSDSQR
MSKRDELLGLNEGLSHLAKCLMQAELAGHRTIGVLYGHTAAGAFIATALATRTLLAVPGAEPEVMDLPSMSRVTKLPIDV
LKEMARATPVFAPGLDNLVKMGAVDAVLDPGRALDAQVGEWLGRPADRGDGRAARGRPVAADVARRVEALARAAR

Sequences:

>Translated_235_residues
MTLDEVLTSLFPKGHSITRSGGLLTGHALLTGTRVDVIGVSERLPFGIDEALTLASHVLDTIERGGDTPILVLVDSDSQR
MSKRDELLGLNEGLSHLAKCLMQAELAGHRTIGVLYGHTAAGAFIATALATRTLLAVPGAEPEVMDLPSMSRVTKLPIDV
LKEMARATPVFAPGLDNLVKMGAVDAVLDPGRALDAQVGEWLGRPADRGDGRAARGRPVAADVARRVEALARAAR
>Mature_234_residues
TLDEVLTSLFPKGHSITRSGGLLTGHALLTGTRVDVIGVSERLPFGIDEALTLASHVLDTIERGGDTPILVLVDSDSQRM
SKRDELLGLNEGLSHLAKCLMQAELAGHRTIGVLYGHTAAGAFIATALATRTLLAVPGAEPEVMDLPSMSRVTKLPIDVL
KEMARATPVFAPGLDNLVKMGAVDAVLDPGRALDAQVGEWLGRPADRGDGRAARGRPVAADVARRVEALARAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24748; Mature: 24617

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDEVLTSLFPKGHSITRSGGLLTGHALLTGTRVDVIGVSERLPFGIDEALTLASHVLD
CCHHHHHHHHCCCCCCEECCCCEEECHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHH
TIERGGDTPILVLVDSDSQRMSKRDELLGLNEGLSHLAKCLMQAELAGHRTIGVLYGHTA
HHHCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
AGAFIATALATRTLLAVPGAEPEVMDLPSMSRVTKLPIDVLKEMARATPVFAPGLDNLVK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHH
MGAVDAVLDPGRALDAQVGEWLGRPADRGDGRAARGRPVAADVARRVEALARAAR
HCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLDEVLTSLFPKGHSITRSGGLLTGHALLTGTRVDVIGVSERLPFGIDEALTLASHVLD
CHHHHHHHHCCCCCCEECCCCEEECHHHEECCEEEEEECCCCCCCCHHHHHHHHHHHHH
TIERGGDTPILVLVDSDSQRMSKRDELLGLNEGLSHLAKCLMQAELAGHRTIGVLYGHTA
HHHCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH
AGAFIATALATRTLLAVPGAEPEVMDLPSMSRVTKLPIDVLKEMARATPVFAPGLDNLVK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHH
MGAVDAVLDPGRALDAQVGEWLGRPADRGDGRAARGRPVAADVARRVEALARAAR
HCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA