| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is astA [H]
Identifier: 115351117
GI number: 115351117
Start: 1154259
End: 1155305
Strand: Direct
Name: astA [H]
Synonym: Bamb_1063
Alternate gene names: 115351117
Gene position: 1154259-1155305 (Clockwise)
Preceding gene: 115351116
Following gene: 115351118
Centisome position: 32.45
GC content: 68.19
Gene sequence:
>1047_bases ATGATCGTCGTTCGGGTCGTACAAACGGGCGACGTCGACGCGCTCGTGTCGCTCGCGCAGGAAACCGGGCCGGGCCTGAC CACGTTCAAGCCCGACCGCGACGCGCTCGCCGCGCGCATCGAACGCTCGCGCCGCACGCTCGAGGGCAACGCCGCGCCGG GCGAAGCCGGCTACTTCTTCGTGATGGAAGACTCGAAGACGGGCGACATCGCGGGCGTGTGCGGGATCGAGACGCAGGTC GGCCTCGAACAGCCGTTCTACAACTATCGCGTGAGCACGGTCGTGCACGCGAGCCAGGAGCTCGGCGTGTGGACGCGGAT GTCCGCGCTCAACATCTCGCATGACCTGACGGGCTACGCGGAAGTGTGCTCGCTGTTCCTGAGCCCGCGCTATCGCACGG GCGGTGTCGGCGGCTTGCTGTCGCGCTCGCGCTTCATGTTCATCGCGCAGTTCCGCGACCGGTTCCCGGAACGCATCTGC GCGGAACTGCGCGGCCACTTCGACGAAGACGGCACGTCGCCGTTCTGGCGCGCGGTCGGTTCGCACTTCTACCAGATCGA TTTCAATGCGGCGGACTACCTGAGCTCGCACGGCCGCAAGTCGTTCCTCGCGGAGCTGATGCCGCGCTATCCGGTGTACG TCGACCTGCTGCCGCAGGACGCGCAGGACGCGGTCGGCCTCACGCACCGCGACACGCTGCCGGCGCGCAAGATGCTCGAG GCGGAAGGGCTGCGCTACCAGAACCACGTCGACATCTTCGACGCGGGCCCGGTGCTCGAATGCCACGTCAACGACCTGCG CACGGTGCGCGAGAGCGTCGTTGTGCCGGTCGCGATCGGCGAGCCGGACACCGGTGACGACGCGCGGGGCGACCGTGCGC CGAAGTCGCTCGTGTCGAACACGTCGCTGAACGATTTCCGCGTCGGCGTCGCGCCCGGCGTGGTCGCGAACGGTGCGTTC GTGCTGTCGGCCGACGATGCCGCCGCGCTCGACGTGAAGGCCGGCGATCCGGTGCGCGTGCTGCCGCTCAAAGTCAAACA GGGATAA
Upstream 100 bases:
>100_bases CCGGCGACGTGCGCGCGGCGCTCGATGTGAAGGATGGCGATGTCGTGCGCTGCGTGCCGCTGCACCGCCGCGACGATGAA GAAACGAAGGGAGGCGCAGC
Downstream 100 bases:
>100_bases ACGAATCATGACGGAACTCTTCATCGACGGCGCCTGGATCGCAGGCTCGGGCCCCGCCTTCGCTTCGCGCAACCCGGGCA CCGACGCGATCGCGTGGCAG
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MIVVRVVQTGDVDALVSLAQETGPGLTTFKPDRDALAARIERSRRTLEGNAAPGEAGYFFVMEDSKTGDIAGVCGIETQV GLEQPFYNYRVSTVVHASQELGVWTRMSALNISHDLTGYAEVCSLFLSPRYRTGGVGGLLSRSRFMFIAQFRDRFPERIC AELRGHFDEDGTSPFWRAVGSHFYQIDFNAADYLSSHGRKSFLAELMPRYPVYVDLLPQDAQDAVGLTHRDTLPARKMLE AEGLRYQNHVDIFDAGPVLECHVNDLRTVRESVVVPVAIGEPDTGDDARGDRAPKSLVSNTSLNDFRVGVAPGVVANGAF VLSADDAAALDVKAGDPVRVLPLKVKQG
Sequences:
>Translated_348_residues MIVVRVVQTGDVDALVSLAQETGPGLTTFKPDRDALAARIERSRRTLEGNAAPGEAGYFFVMEDSKTGDIAGVCGIETQV GLEQPFYNYRVSTVVHASQELGVWTRMSALNISHDLTGYAEVCSLFLSPRYRTGGVGGLLSRSRFMFIAQFRDRFPERIC AELRGHFDEDGTSPFWRAVGSHFYQIDFNAADYLSSHGRKSFLAELMPRYPVYVDLLPQDAQDAVGLTHRDTLPARKMLE AEGLRYQNHVDIFDAGPVLECHVNDLRTVRESVVVPVAIGEPDTGDDARGDRAPKSLVSNTSLNDFRVGVAPGVVANGAF VLSADDAAALDVKAGDPVRVLPLKVKQG >Mature_348_residues MIVVRVVQTGDVDALVSLAQETGPGLTTFKPDRDALAARIERSRRTLEGNAAPGEAGYFFVMEDSKTGDIAGVCGIETQV GLEQPFYNYRVSTVVHASQELGVWTRMSALNISHDLTGYAEVCSLFLSPRYRTGGVGGLLSRSRFMFIAQFRDRFPERIC AELRGHFDEDGTSPFWRAVGSHFYQIDFNAADYLSSHGRKSFLAELMPRYPVYVDLLPQDAQDAVGLTHRDTLPARKMLE AEGLRYQNHVDIFDAGPVLECHVNDLRTVRESVVVPVAIGEPDTGDDARGDRAPKSLVSNTSLNDFRVGVAPGVVANGAF VLSADDAAALDVKAGDPVRVLPLKVKQG
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=347, Percent_Identity=47.5504322766571, Blast_Score=341, Evalue=4e-95,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 37991; Mature: 37991
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVRVVQTGDVDALVSLAQETGPGLTTFKPDRDALAARIERSRRTLEGNAAPGEAGYFF CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEE VMEDSKTGDIAGVCGIETQVGLEQPFYNYRVSTVVHASQELGVWTRMSALNISHDLTGYA EEECCCCCCEEEEECCCCCCCCCCCCHHEEEEHEEECHHHCCCEEEHHHHCCCCCCCCHH EVCSLFLSPRYRTGGVGGLLSRSRFMFIAQFRDRFPERICAELRGHFDEDGTSPFWRAVG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHC SHFYQIDFNAADYLSSHGRKSFLAELMPRYPVYVDLLPQDAQDAVGLTHRDTLPARKMLE CEEEEEECCHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHH AEGLRYQNHVDIFDAGPVLECHVNDLRTVRESVVVPVAIGEPDTGDDARGDRAPKSLVSN HCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHC TSLNDFRVGVAPGVVANGAFVLSADDAAALDVKAGDPVRVLPLKVKQG CCCCCEEEECCCCEEECCEEEEECCCCEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure MIVVRVVQTGDVDALVSLAQETGPGLTTFKPDRDALAARIERSRRTLEGNAAPGEAGYFF CEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEE VMEDSKTGDIAGVCGIETQVGLEQPFYNYRVSTVVHASQELGVWTRMSALNISHDLTGYA EEECCCCCCEEEEECCCCCCCCCCCCHHEEEEHEEECHHHCCCEEEHHHHCCCCCCCCHH EVCSLFLSPRYRTGGVGGLLSRSRFMFIAQFRDRFPERICAELRGHFDEDGTSPFWRAVG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHC SHFYQIDFNAADYLSSHGRKSFLAELMPRYPVYVDLLPQDAQDAVGLTHRDTLPARKMLE CEEEEEECCHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHH AEGLRYQNHVDIFDAGPVLECHVNDLRTVRESVVVPVAIGEPDTGDDARGDRAPKSLVSN HCCCCCCCCEEEECCCCEEEEEHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHC TSLNDFRVGVAPGVVANGAFVLSADDAAALDVKAGDPVRVLPLKVKQG CCCCCEEEECCCCEEECCEEEEECCCCEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA