| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is astA [H]
Identifier: 115351116
GI number: 115351116
Start: 1153201
End: 1154262
Strand: Direct
Name: astA [H]
Synonym: Bamb_1062
Alternate gene names: 115351116
Gene position: 1153201-1154262 (Clockwise)
Preceding gene: 115351115
Following gene: 115351117
Centisome position: 32.42
GC content: 68.74
Gene sequence:
>1062_bases ATGCTATTTGTTCGCCCCGGCAAACTCACGGATCTGGATGCGCTCGCGCACATGGCGCGCACCGCGCAGCCGGTCCTGCA CTCGCTGCCGCATGACCGCGCGGCGCTCGAAGCGCGCGTGGCGCTCTCCGAGGATTCGTTTCGCGCGGACGTCGACTTCG CCGGCGAAGAGTTCTACCTCTTCGTGCTGGAAGACTCGTCGACGGGCAAGCTGCTCGGCACGGCGAGCATCGTGGCCGCG GCCGGCTACTCGGAACCGTTCTACGCGTTCCGCAACGACGCCCTGATCCACGCGTCGCGCGAGCTGCACGTGAACCGCAA GATCCACGCGCTCACGATGTCGCACGAGCTGACCGGCAAGAGCCGGCTGGCCGGCTTCTACGTCGATCCGTCGCTGCGCG GCGACGCGGCCGCGCACCTGATCTCGCGTGCGCGGATGATGTACATCTCCGCGAACCGCCGCCGCTTCACGCCGGAAGTG TTCACGCTGCTGCTCGGCGTGAGCGACAACACGGGCGCCTCGCCGTTCTGGGAAGCGGTAGGCCGCAAGTTCTTCGGCCG CGACTTCACCGACGTCGACATCGCGTCGGGCGGCCGCAGCCGCACGTTCATCGCGGAAGTGATGCCGGCCTATCCGCTCT ACGTGCCGCTGCTGCCGGAAGCCGCGCAGCGCGTGCTCGGCGAGCCGAACGAAACGGCGCTGCTCGCGTATGACATCCAT CTCGAGGAAGGCTTCGAGCCCGACCGCTTCGTCGACATCTTCGACGCGGGTCCGGTGCTGACCGCGCAGGTCGACCGCAT CGCATGCGTGAAGCACGCCGCGGAGCGCACCGTGCGCGAAGCCGCGCGGCAGCAGGGCGACGCTGCGTACATGGTGTCGA CGGGCAGCGGCGAATCGTTCCGCTGCGTGCTGGCCGACCTGCCGGACGACGATGCGCACGGCGACCTGGCGCCGCTGTCC GGCGACGTGCGCGCGGCGCTCGATGTGAAGGATGGCGATGTCGTGCGCTGCGTGCCGCTGCACCGCCGCGACGATGAAGA AACGAAGGGAGGCGCAGCATGA
Upstream 100 bases:
>100_bases CGAAGGCATGAAGCGCTTCGAGAAGGCAGTCGAACAGGTGCTCGCGCCCCAGGAAGCCACCGCGCGCTGATCGGCGCACC CATCGCAGACAGGAACGACG
Downstream 100 bases:
>100_bases TCGTCGTTCGGGTCGTACAAACGGGCGACGTCGACGCGCTCGTGTCGCTCGCGCAGGAAACCGGGCCGGGCCTGACCACG TTCAAGCCCGACCGCGACGC
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: ARUAI; AOST; AST [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MLFVRPGKLTDLDALAHMARTAQPVLHSLPHDRAALEARVALSEDSFRADVDFAGEEFYLFVLEDSSTGKLLGTASIVAA AGYSEPFYAFRNDALIHASRELHVNRKIHALTMSHELTGKSRLAGFYVDPSLRGDAAAHLISRARMMYISANRRRFTPEV FTLLLGVSDNTGASPFWEAVGRKFFGRDFTDVDIASGGRSRTFIAEVMPAYPLYVPLLPEAAQRVLGEPNETALLAYDIH LEEGFEPDRFVDIFDAGPVLTAQVDRIACVKHAAERTVREAARQQGDAAYMVSTGSGESFRCVLADLPDDDAHGDLAPLS GDVRAALDVKDGDVVRCVPLHRRDDEETKGGAA
Sequences:
>Translated_353_residues MLFVRPGKLTDLDALAHMARTAQPVLHSLPHDRAALEARVALSEDSFRADVDFAGEEFYLFVLEDSSTGKLLGTASIVAA AGYSEPFYAFRNDALIHASRELHVNRKIHALTMSHELTGKSRLAGFYVDPSLRGDAAAHLISRARMMYISANRRRFTPEV FTLLLGVSDNTGASPFWEAVGRKFFGRDFTDVDIASGGRSRTFIAEVMPAYPLYVPLLPEAAQRVLGEPNETALLAYDIH LEEGFEPDRFVDIFDAGPVLTAQVDRIACVKHAAERTVREAARQQGDAAYMVSTGSGESFRCVLADLPDDDAHGDLAPLS GDVRAALDVKDGDVVRCVPLHRRDDEETKGGAA >Mature_353_residues MLFVRPGKLTDLDALAHMARTAQPVLHSLPHDRAALEARVALSEDSFRADVDFAGEEFYLFVLEDSSTGKLLGTASIVAA AGYSEPFYAFRNDALIHASRELHVNRKIHALTMSHELTGKSRLAGFYVDPSLRGDAAAHLISRARMMYISANRRRFTPEV FTLLLGVSDNTGASPFWEAVGRKFFGRDFTDVDIASGGRSRTFIAEVMPAYPLYVPLLPEAAQRVLGEPNETALLAYDIH LEEGFEPDRFVDIFDAGPVLTAQVDRIACVKHAAERTVREAARQQGDAAYMVSTGSGESFRCVLADLPDDDAHGDLAPLS GDVRAALDVKDGDVVRCVPLHRRDDEETKGGAA
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine. Also acts on L-ornithine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=341, Percent_Identity=34.6041055718475, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR017651 - InterPro: IPR007041 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 38562; Mature: 38562
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFVRPGKLTDLDALAHMARTAQPVLHSLPHDRAALEARVALSEDSFRADVDFAGEEFYL CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCEEECCCEEEE FVLEDSSTGKLLGTASIVAAAGYSEPFYAFRNDALIHASRELHVNRKIHALTMSHELTGK EEEECCCCCCEEEHHHHHEECCCCCCCHHHCCCEEEEECCEEEECCEEEEEEEECCCCCC SRLAGFYVDPSLRGDAAAHLISRARMMYISANRRRFTPEVFTLLLGVSDNTGASPFWEAV CCEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHEEEEECCCCCCCCHHHHHH GRKFFGRDFTDVDIASGGRSRTFIAEVMPAYPLYVPLLPEAAQRVLGEPNETALLAYDIH HHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEE LEEGFEPDRFVDIFDAGPVLTAQVDRIACVKHAAERTVREAARQQGDAAYMVSTGSGESF ECCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCE RCVLADLPDDDAHGDLAPLSGDVRAALDVKDGDVVRCVPLHRRDDEETKGGAA EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MLFVRPGKLTDLDALAHMARTAQPVLHSLPHDRAALEARVALSEDSFRADVDFAGEEFYL CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCEEECCCEEEE FVLEDSSTGKLLGTASIVAAAGYSEPFYAFRNDALIHASRELHVNRKIHALTMSHELTGK EEEECCCCCCEEEHHHHHEECCCCCCCHHHCCCEEEEECCEEEECCEEEEEEEECCCCCC SRLAGFYVDPSLRGDAAAHLISRARMMYISANRRRFTPEVFTLLLGVSDNTGASPFWEAV CCEEEEEECCCCCCHHHHHHHHHHEEEEEECCCCCCCHHHHEEEEECCCCCCCCHHHHHH GRKFFGRDFTDVDIASGGRSRTFIAEVMPAYPLYVPLLPEAAQRVLGEPNETALLAYDIH HHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHCCCCCCEEEEEEEE LEEGFEPDRFVDIFDAGPVLTAQVDRIACVKHAAERTVREAARQQGDAAYMVSTGSGESF ECCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCE RCVLADLPDDDAHGDLAPLSGDVRAALDVKDGDVVRCVPLHRRDDEETKGGAA EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9393691; 10984043; 7523119 [H]