Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yhhW [C]

Identifier: 115351084

GI number: 115351084

Start: 1118920

End: 1119786

Strand: Direct

Name: yhhW [C]

Synonym: Bamb_1030

Alternate gene names: 115351084

Gene position: 1118920-1119786 (Clockwise)

Preceding gene: 115351081

Following gene: 115351085

Centisome position: 31.46

GC content: 68.63

Gene sequence:

>867_bases
ATGAAGAAGATCCAGGGTGTTTACAGCGCGCCGCGTGGCCATTGGGTCGGCGACGGTTTCCCGGTGCGTTCGATGTTCAG
CTATCAGTCTCACGGGGCGCACCTCAGCCCGTTCCTGCTGCTCGACTACGCGGGCCCCGCGAACTTCGAGCCGGCTTCGG
CACCGCGCGGGGTGGGGCAGCACCCGCACCGCGGGTTCGAAACCGTGACGATCGTCTATGACGGCGAAGTCGCTCACCGC
GACTCGACCGGCGCGGGCGGCGTGATCGGCCCGGGCGACGTGCAGTGGATGACGGCCGCGAGCGGGATCCTCCACGAGGA
ATTCCACTCGGAGGCCTTCACGAAGCGCGGCGGTCCGCTCGAGATGGTGCAGCTGTGGGTGAACCTGCCCGCCGCCGACA
AGATGGGCACGCCCGGCTACCAGACGCTGCTGAACGCGGACATCCCGGTGGTCGAGCTGCCGGACGGTGCGGGGCGTGCG
CGGATCATCGCGGGCGAATTCGACGGACGGCGCGGCCCGGCCCGCACGCACACGCCGATCGACGTGTGGGACGTGCGGCT
CGCAGCCGGCGGCCGCGCGCGGTTCCCGATCGCCGAAGGGCGGACGCTCGCGGTGGTGGTGCTGAACGGTACGCTGCTGG
TGAACGGCGAGACGGTCGCCCGCGAAGCGCAGTTCGTGCAACTGAGCCGCGACGGCCGCGACGTCGAGATCGAAGCGAAC
GGCGACGCCAAGCTGTTGATTTTGAGCGGCGAGCCGATCGATGAGCCGGTCGTCGGCTACGGGCCGTTCGTGATGAACTC
GCAAGAGGAAATCCGGACCGCGATCGACGATTTCAACAACGGCCGCTTCGGCCAGATGCCGGCATGA

Upstream 100 bases:

>100_bases
GCTGAGTGCGATTTTCGCAGTCTACCGGATCGATCGTTCCATCTCTATATTCGTACCCAGGATGCGAAGCACGTGTTTCG
CCGCAATTCGGAGAAGGCAA

Downstream 100 bases:

>100_bases
CGGACAGGCCCCGCGCAATTGCGGGGCCTTTTTTCGTGCGCGGAAGGGTGCGTGCGTGCTGCGTGCGCTTCGAGGCATAA
TCGACGGTTGCCGCGCGCCG

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKIQGVYSAPRGHWVGDGFPVRSMFSYQSHGAHLSPFLLLDYAGPANFEPASAPRGVGQHPHRGFETVTIVYDGEVAHR
DSTGAGGVIGPGDVQWMTAASGILHEEFHSEAFTKRGGPLEMVQLWVNLPAADKMGTPGYQTLLNADIPVVELPDGAGRA
RIIAGEFDGRRGPARTHTPIDVWDVRLAAGGRARFPIAEGRTLAVVVLNGTLLVNGETVAREAQFVQLSRDGRDVEIEAN
GDAKLLILSGEPIDEPVVGYGPFVMNSQEEIRTAIDDFNNGRFGQMPA

Sequences:

>Translated_288_residues
MKKIQGVYSAPRGHWVGDGFPVRSMFSYQSHGAHLSPFLLLDYAGPANFEPASAPRGVGQHPHRGFETVTIVYDGEVAHR
DSTGAGGVIGPGDVQWMTAASGILHEEFHSEAFTKRGGPLEMVQLWVNLPAADKMGTPGYQTLLNADIPVVELPDGAGRA
RIIAGEFDGRRGPARTHTPIDVWDVRLAAGGRARFPIAEGRTLAVVVLNGTLLVNGETVAREAQFVQLSRDGRDVEIEAN
GDAKLLILSGEPIDEPVVGYGPFVMNSQEEIRTAIDDFNNGRFGQMPA
>Mature_288_residues
MKKIQGVYSAPRGHWVGDGFPVRSMFSYQSHGAHLSPFLLLDYAGPANFEPASAPRGVGQHPHRGFETVTIVYDGEVAHR
DSTGAGGVIGPGDVQWMTAASGILHEEFHSEAFTKRGGPLEMVQLWVNLPAADKMGTPGYQTLLNADIPVVELPDGAGRA
RIIAGEFDGRRGPARTHTPIDVWDVRLAAGGRARFPIAEGRTLAVVVLNGTLLVNGETVAREAQFVQLSRDGRDVEIEAN
GDAKLLILSGEPIDEPVVGYGPFVMNSQEEIRTAIDDFNNGRFGQMPA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=38.1322957198444, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=38.1322957198444, Blast_Score=149, Evalue=2e-36,
Organism=Escherichia coli, GI1789847, Length=206, Percent_Identity=25.2427184466019, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 30961; Mature: 30961

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIQGVYSAPRGHWVGDGFPVRSMFSYQSHGAHLSPFLLLDYAGPANFEPASAPRGVGQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTIVYDGEVAHRDSTGAGGVIGPGDVQWMTAASGILHEEFHSEAFTKRGGPL
CCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCH
EMVQLWVNLPAADKMGTPGYQTLLNADIPVVELPDGAGRARIIAGEFDGRRGPARTHTPI
HEEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
DVWDVRLAAGGRARFPIAEGRTLAVVVLNGTLLVNGETVAREAQFVQLSRDGRDVEIEAN
EEEEEEEECCCCEECEECCCCEEEEEEEECEEEECCHHHHCCEEEEEEECCCCEEEEEEC
GDAKLLILSGEPIDEPVVGYGPFVMNSQEEIRTAIDDFNNGRFGQMPA
CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKIQGVYSAPRGHWVGDGFPVRSMFSYQSHGAHLSPFLLLDYAGPANFEPASAPRGVGQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTIVYDGEVAHRDSTGAGGVIGPGDVQWMTAASGILHEEFHSEAFTKRGGPL
CCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCH
EMVQLWVNLPAADKMGTPGYQTLLNADIPVVELPDGAGRARIIAGEFDGRRGPARTHTPI
HEEEEECCCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
DVWDVRLAAGGRARFPIAEGRTLAVVVLNGTLLVNGETVAREAQFVQLSRDGRDVEIEAN
EEEEEEEECCCCEECEECCCCEEEEEEEECEEEECCHHHHCCEEEEEEECCCCEEEEEEC
GDAKLLILSGEPIDEPVVGYGPFVMNSQEEIRTAIDDFNNGRFGQMPA
CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]