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The map label for this gene is rmuC [H]

Identifier: 115351034

GI number: 115351034

Start: 1069946

End: 1071433

Strand: Direct

Name: rmuC [H]

Synonym: Bamb_0980

Alternate gene names: 115351034

Gene position: 1069946-1071433 (Clockwise)

Preceding gene: 115351033

Following gene: 115351041

Centisome position: 30.08

GC content: 68.82

Gene sequence:

>1488_bases
ATGACGACGATGTTGTTGCTGGCGGCGGTCGTCGTGCTGGCCGTCGCGCTCGCGGTGGCGATCGTCGCGCTCGTGCGCGG
CGGCGGCCGCCACGACGATGCGGCCGTGCTCGGCGACCAGATCGAAGACGCCGCGCACGCGCAGGCGCTCGCGGTCGAGC
GGCTCGAACGCGAGCTGCGCGGCGAGATCGTCGAGAACGCGCGCGGCTCGCGCACCGAGCTGGCCGGCAGTTTCTCGCAG
CTTCAGCAGACGCTCGCGACCCAGCTGACGAGCATCGCGACCGTGCAGAACAACCAGATCGACGGTTTCGCGCAACAGCT
CGGCAAGCTCGTCGCCGGCAACGCGCAGCAGTTCGACGCGATGCGCGAGAGCGTGCAGCGTCAGGCCCAGCAGGCGCGCG
AAGAGCAGACGGTCGCGCTGCGGCTGTTCGGCGACACGCTGAACCGGCAGCTCACGCAACTGACGGAGGCCAACGATCGC
CGGATCGGCGAAGTGCGTGCGACGCTCGAGCAGCGGCTGAAGGAAATCGAGACGAACAACGCGGCGAAGCTCGAGGAGAT
GCGTCGCACCGTCGACGAGAAGCTGCATGCGACGCTCGAACACCGGCTCGGCGAATCGTTCAAGCTCGTATCGGACCGGC
TCGAGCAGGTGCACCGCGGGCTCGGCGAGATGCAGACGCTCGCGGCCGGCGTCGGCGATCTGAAGAAGGTGCTGACCAAC
GTGAAGACCCGCGGCACCTGGGGCGAGGTGCAGCTCGAGGCATTGCTCGAGCAGATGCTCACGCCCGACCAGTACGCGAA
GAACGTCGCGACGGTGCCGAGGAGCAGCGAACGCGTCGAGTTCGCGATCCGGCTGCCGGGCCGCGCCGCCGGGACGGGCG
ACGCGCCGCCGGTGTGGCTGCCGATCGACGCGAAGTTTCCGCGCGAGGACTACGAGCGGCTGATCGATGCGCAGGAACGT
GCCGATTCGGTGGAGGTCGAGGAAGCGGCCCGTGCGCTCGAGGCGCGCGTGCGGATGGAGGCGAGGACGATCGCCGAGAA
GTACGTCGCACCGCCGCATACGACCGATTTCGCGCTGCTGTTCCTGCCGACCGAGGGGCTCTTTGCGGAGATCCTGCGTC
GCCCCGGGCTGACCGATATGCTGCAGCGCGACTATCGCGTGACGGTGGCCGGGCCGACCACGCTGACCGCCTTGCTGAAC
AGCTTGCAGATGGGCTTTCGCACGCTCGCGATCGAGCAGCGCTCGAGCGAAGTGTGGCAGGTGCTCGGCGCGGTAAAGAC
CGAGTTCGGCAAGTTCGGCGATGTGCTTGCGCGCACGAAGGCGCAGCTCGAAACGGTCACGCGCTCGATCGAGGCGGCCG
AGCAGCGCACGCGCGTGATGAACCGCAAGCTGAAGCAGGTCGAGGCGTTACCGGGCGATACGGCGGCCGGGCTGCTGGGC
GCGGAAGTCGCGGACGGTGCAGACGGCGCCGATGCGGACGAGGCATGA

Upstream 100 bases:

>100_bases
ACCTCGCGGCCGACAACCTGATCGCCGCACTGGGCGTGGGGCCGCGCGCGGGGCAGCCGCCGAATCCGATCAACCCGGAC
GTGATCGGGAAGCCGCGCGC

Downstream 100 bases:

>100_bases
CGCACGACGTGTGCGGCCGCAACCGGCTGAAACGAAAAACGGGCGCCGCGGCGCCCGTTTTTTTGCAGCGGCGGCCGGCA
TGGCCGGCCCGCGTTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTTMLLLAAVVVLAVALAVAIVALVRGGGRHDDAAVLGDQIEDAAHAQALAVERLERELRGEIVENARGSRTELAGSFSQ
LQQTLATQLTSIATVQNNQIDGFAQQLGKLVAGNAQQFDAMRESVQRQAQQAREEQTVALRLFGDTLNRQLTQLTEANDR
RIGEVRATLEQRLKEIETNNAAKLEEMRRTVDEKLHATLEHRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPRSSERVEFAIRLPGRAAGTGDAPPVWLPIDAKFPREDYERLIDAQER
ADSVEVEEAARALEARVRMEARTIAEKYVAPPHTTDFALLFLPTEGLFAEILRRPGLTDMLQRDYRVTVAGPTTLTALLN
SLQMGFRTLAIEQRSSEVWQVLGAVKTEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMNRKLKQVEALPGDTAAGLLG
AEVADGADGADADEA

Sequences:

>Translated_495_residues
MTTMLLLAAVVVLAVALAVAIVALVRGGGRHDDAAVLGDQIEDAAHAQALAVERLERELRGEIVENARGSRTELAGSFSQ
LQQTLATQLTSIATVQNNQIDGFAQQLGKLVAGNAQQFDAMRESVQRQAQQAREEQTVALRLFGDTLNRQLTQLTEANDR
RIGEVRATLEQRLKEIETNNAAKLEEMRRTVDEKLHATLEHRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPRSSERVEFAIRLPGRAAGTGDAPPVWLPIDAKFPREDYERLIDAQER
ADSVEVEEAARALEARVRMEARTIAEKYVAPPHTTDFALLFLPTEGLFAEILRRPGLTDMLQRDYRVTVAGPTTLTALLN
SLQMGFRTLAIEQRSSEVWQVLGAVKTEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMNRKLKQVEALPGDTAAGLLG
AEVADGADGADADEA
>Mature_494_residues
TTMLLLAAVVVLAVALAVAIVALVRGGGRHDDAAVLGDQIEDAAHAQALAVERLERELRGEIVENARGSRTELAGSFSQL
QQTLATQLTSIATVQNNQIDGFAQQLGKLVAGNAQQFDAMRESVQRQAQQAREEQTVALRLFGDTLNRQLTQLTEANDRR
IGEVRATLEQRLKEIETNNAAKLEEMRRTVDEKLHATLEHRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTNV
KTRGTWGEVQLEALLEQMLTPDQYAKNVATVPRSSERVEFAIRLPGRAAGTGDAPPVWLPIDAKFPREDYERLIDAQERA
DSVEVEEAARALEARVRMEARTIAEKYVAPPHTTDFALLFLPTEGLFAEILRRPGLTDMLQRDYRVTVAGPTTLTALLNS
LQMGFRTLAIEQRSSEVWQVLGAVKTEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMNRKLKQVEALPGDTAAGLLGA
EVADGADGADADEA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 54295; Mature: 54164

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMLLLAAVVVLAVALAVAIVALVRGGGRHDDAAVLGDQIEDAAHAQALAVERLERELR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIVENARGSRTELAGSFSQLQQTLATQLTSIATVQNNQIDGFAQQLGKLVAGNAQQFDA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
MRESVQRQAQQAREEQTVALRLFGDTLNRQLTQLTEANDRRIGEVRATLEQRLKEIETNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
AAKLEEMRRTVDEKLHATLEHRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPRSSERVEFAIRLPGRAAGTGDAPPVWL
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEE
PIDAKFPREDYERLIDAQERADSVEVEEAARALEARVRMEARTIAEKYVAPPHTTDFALL
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FLPTEGLFAEILRRPGLTDMLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIEQRSSEVWQ
EECCCHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAVKTEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMNRKLKQVEALPGDTAAGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AEVADGADGADADEA
HHHCCCCCCCCCCCC
>Mature Secondary Structure 
TTMLLLAAVVVLAVALAVAIVALVRGGGRHDDAAVLGDQIEDAAHAQALAVERLERELR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEIVENARGSRTELAGSFSQLQQTLATQLTSIATVQNNQIDGFAQQLGKLVAGNAQQFDA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
MRESVQRQAQQAREEQTVALRLFGDTLNRQLTQLTEANDRRIGEVRATLEQRLKEIETNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
AAKLEEMRRTVDEKLHATLEHRLGESFKLVSDRLEQVHRGLGEMQTLAAGVGDLKKVLTN
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTRGTWGEVQLEALLEQMLTPDQYAKNVATVPRSSERVEFAIRLPGRAAGTGDAPPVWL
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEE
PIDAKFPREDYERLIDAQERADSVEVEEAARALEARVRMEARTIAEKYVAPPHTTDFALL
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FLPTEGLFAEILRRPGLTDMLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIEQRSSEVWQ
EECCCHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGAVKTEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMNRKLKQVEALPGDTAAGLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AEVADGADGADADEA
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]