Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350926

Identifier: 115350926

GI number: 115350926

Start: 957749

End: 958231

Strand: Direct

Name: 115350926

Synonym: Bamb_0872

Alternate gene names: NA

Gene position: 957749-958231 (Clockwise)

Preceding gene: 115350925

Following gene: 115350933

Centisome position: 26.93

GC content: 69.77

Gene sequence:

>483_bases
ATGAAACGGCTGATGGTATTGATCGGCGCCGTGCTCGCGAGCCTGCCGGCGTGGGCCGGCGAGCTTCAGCCGCTGCGCGC
GGCCGAGGTCGCGAAGTTGTATGCGACGGCGCACGAACGGCCGCTCGCGGTCGAGATCTGGTCGCTCGATTGCGGATACT
GCCGCGAGAACGCCGCGCATCTCGTCGCGTGGCAGCGCCGGCATCCGGACGTGCAGCTCGCGATGGTCGCGATGGACGCT
TATGACGACAACGGCGCCGCGATCGCCCAGGCGCTCGCGCAAATGAACCTGCCGCCGCAGGTCGCGCAGTATGCGAACGC
GGAGCCGATGCCCGAGCGTCTGCGGGCGGCGCTCGATGCGGGATGGCGGGGAGAAATGCCGCGTACCGTGTGGATCGGTC
GCGATGGCGCACGCGAAGCGCGCAGCGGATTGCTGACGACCGACGTGCTCGACGGCTGGTCGCAGCGCGGCAAGCGCCGC
TGA

Upstream 100 bases:

>100_bases
CGAGCGACAATCCGCAACTGCTCGACGACACGGGGCGCATCTACCTGTCGTGGCGTACGCGTAACGACGGCTACCGGCTG
ATTCCCGTGGAGGGCGCGCA

Downstream 100 bases:

>100_bases
AACGGCAGGCGGCGCGCGGGATGTCGCGCGCCGCTTCGATGCGAAAACGAACGCGCGCCCCCCAAGGCGCGCGAGAAGAT
CGTCAGGCCGCGCGCCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Thiol-Disulfide Isomerase And Thioredoxin; Thiol-Disulfide Isomerase-Like Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKRLMVLIGAVLASLPAWAGELQPLRAAEVAKLYATAHERPLAVEIWSLDCGYCRENAAHLVAWQRRHPDVQLAMVAMDA
YDDNGAAIAQALAQMNLPPQVAQYANAEPMPERLRAALDAGWRGEMPRTVWIGRDGAREARSGLLTTDVLDGWSQRGKRR

Sequences:

>Translated_160_residues
MKRLMVLIGAVLASLPAWAGELQPLRAAEVAKLYATAHERPLAVEIWSLDCGYCRENAAHLVAWQRRHPDVQLAMVAMDA
YDDNGAAIAQALAQMNLPPQVAQYANAEPMPERLRAALDAGWRGEMPRTVWIGRDGAREARSGLLTTDVLDGWSQRGKRR
>Mature_160_residues
MKRLMVLIGAVLASLPAWAGELQPLRAAEVAKLYATAHERPLAVEIWSLDCGYCRENAAHLVAWQRRHPDVQLAMVAMDA
YDDNGAAIAQALAQMNLPPQVAQYANAEPMPERLRAALDAGWRGEMPRTVWIGRDGAREARSGLLTTDVLDGWSQRGKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17684; Mature: 17684

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLMVLIGAVLASLPAWAGELQPLRAAEVAKLYATAHERPLAVEIWSLDCGYCRENAAH
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCHHH
LVAWQRRHPDVQLAMVAMDAYDDNGAAIAQALAQMNLPPQVAQYANAEPMPERLRAALDA
HHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCC
GWRGEMPRTVWIGRDGAREARSGLLTTDVLDGWSQRGKRR
CCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLMVLIGAVLASLPAWAGELQPLRAAEVAKLYATAHERPLAVEIWSLDCGYCRENAAH
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCHHH
LVAWQRRHPDVQLAMVAMDAYDDNGAAIAQALAQMNLPPQVAQYANAEPMPERLRAALDA
HHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHCC
GWRGEMPRTVWIGRDGAREARSGLLTTDVLDGWSQRGKRR
CCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA