Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350923

Identifier: 115350923

GI number: 115350923

Start: 953556

End: 954023

Strand: Direct

Name: 115350923

Synonym: Bamb_0869

Alternate gene names: NA

Gene position: 953556-954023 (Clockwise)

Preceding gene: 115350920

Following gene: 115350924

Centisome position: 26.81

GC content: 67.95

Gene sequence:

>468_bases
ATGCCGACTATTGCATCCGGCTCAATCGGCAACCGGCGGGTGCTTGCTATACTTGCGCGCACTTTTTCCTGGACCGCGAT
GAAACGGACGACGCGATGGATCGGCCTCGTATGGCTGGCGCTAGTACTGAACGTACTGTCGCCCGTTATCGGCTACGCGC
GCGTCGCGTCGAGCGGTTCCGGCGAACTCACGCTCGAGCTGTGCAGCGCGGCAGGCGCTCGCCAGGTCATCCTCGCGCAG
TCCGGCGACGATCTCGGCGCAGCGTCGTTCGACCATGCCGGCGTGCCGCACTGCGTGTACTGTCCCGGCTTCGCGGCGAA
CGTCGCGCTCGGCGCGAGCCTGCCCGCGTTGCCGGGTTTCGTACGCGCGTTCGCGTACCGGGCGGCCGCCCCGGCCGTTC
CCGATTTTCCCCGCAAGGGCATCCGCCTCGCGCAGCCGCGCGGTCCGCCTGAAAACGTCCCGATCTGA

Upstream 100 bases:

>100_bases
CCAATAATTATCAACCTCGCGCTTGGATTTGTGCCAGCGGCGAATCGTTAGATTTTGTCTCTGTTGTATTAACGGCACAT
GCGCTGCGGCGCGCCGTGCG

Downstream 100 bases:

>100_bases
TTGACATCGTTCGCGCGCCCCGGTGGCGCGCGTGCCGCCCGCGGCCCGGTCCGCGCGCCGCGCCGTAGGCGCGCGGCGCG
TCGGCGCGCGTCCGGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPTIASGSIGNRRVLAILARTFSWTAMKRTTRWIGLVWLALVLNVLSPVIGYARVASSGSGELTLELCSAAGARQVILAQ
SGDDLGAASFDHAGVPHCVYCPGFAANVALGASLPALPGFVRAFAYRAAAPAVPDFPRKGIRLAQPRGPPENVPI

Sequences:

>Translated_155_residues
MPTIASGSIGNRRVLAILARTFSWTAMKRTTRWIGLVWLALVLNVLSPVIGYARVASSGSGELTLELCSAAGARQVILAQ
SGDDLGAASFDHAGVPHCVYCPGFAANVALGASLPALPGFVRAFAYRAAAPAVPDFPRKGIRLAQPRGPPENVPI
>Mature_154_residues
PTIASGSIGNRRVLAILARTFSWTAMKRTTRWIGLVWLALVLNVLSPVIGYARVASSGSGELTLELCSAAGARQVILAQS
GDDLGAASFDHAGVPHCVYCPGFAANVALGASLPALPGFVRAFAYRAAAPAVPDFPRKGIRLAQPRGPPENVPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16150; Mature: 16019

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIASGSIGNRRVLAILARTFSWTAMKRTTRWIGLVWLALVLNVLSPVIGYARVASSGS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GELTLELCSAAGARQVILAQSGDDLGAASFDHAGVPHCVYCPGFAANVALGASLPALPGF
CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCHHHH
VRAFAYRAAAPAVPDFPRKGIRLAQPRGPPENVPI
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure 
PTIASGSIGNRRVLAILARTFSWTAMKRTTRWIGLVWLALVLNVLSPVIGYARVASSGS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GELTLELCSAAGARQVILAQSGDDLGAASFDHAGVPHCVYCPGFAANVALGASLPALPGF
CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCHHHH
VRAFAYRAAAPAVPDFPRKGIRLAQPRGPPENVPI
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA