| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is minE
Identifier: 115350899
GI number: 115350899
Start: 932619
End: 932873
Strand: Direct
Name: minE
Synonym: Bamb_0845
Alternate gene names: 115350899
Gene position: 932619-932873 (Clockwise)
Preceding gene: 115350898
Following gene: 115350900
Centisome position: 26.22
GC content: 61.57
Gene sequence:
>255_bases ATGTCCATCCTTTCGTTTCTCCTCGGTGAGAAGAAGAAGTCCGCATCGGTCGCGAAGGAGCGCCTGCAGCTCATCATCGC GCACGAGCGGGTCGGCGGCCGGCCACCGGCCGATTACCTGCCGGCGCTGCAGAAGGAGCTGGTGGCGGTCATCTCGAAGT ACGTCCGTATTTCGAACGACGACATCCGCGTGAGCCTCGAGCGCCAGGACGATCTCGAAGTCCTCGAAGTGAAGATCGAG ATCCCGCAAGCCTGA
Upstream 100 bases:
>100_bases CGCTCGCTTCCTCGGCGAGGACAAGCCGCTGCGCTTCACCGATTACCAGAAGCCGGGCCTGCTGCAGCGCCTCTTCGGCA GCAAGTAACGGAGGCCGCCC
Downstream 100 bases:
>100_bases CGTTTGTCGGCCTCTCTCCGCACGGCGGCGCATGCCGTCGTGCGCGTCTTACGCCCTGTTGCACTTTCGGGCTCGCCGTA ACACGGTGTCTGTCGGCCGT
Product: cell division topological specificity factor MinE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSILSFLLGEKKKSASVAKERLQLIIAHERVGGRPPADYLPALQKELVAVISKYVRISNDDIRVSLERQDDLEVLEVKIE IPQA
Sequences:
>Translated_84_residues MSILSFLLGEKKKSASVAKERLQLIIAHERVGGRPPADYLPALQKELVAVISKYVRISNDDIRVSLERQDDLEVLEVKIE IPQA >Mature_83_residues SILSFLLGEKKKSASVAKERLQLIIAHERVGGRPPADYLPALQKELVAVISKYVRISNDDIRVSLERQDDLEVLEVKIEI PQA
Specific function: Prevents the cell division inhibition by proteins minC and minD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the l
COG id: COG0851
COG function: function code D; Septum formation topological specificity factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minE family
Homologues:
Organism=Escherichia coli, GI1787422, Length=85, Percent_Identity=43.5294117647059, Blast_Score=72, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINE_BURA4 (B1YUM1)
Other databases:
- EMBL: CP001025 - RefSeq: YP_001807564.1 - ProteinModelPortal: B1YUM1 - SMR: B1YUM1 - GeneID: 6178444 - GenomeReviews: CP001025_GR - KEGG: bac:BamMC406_0857 - HOGENOM: HBG449956 - OMA: SLERQDN - ProtClustDB: PRK13989 - BioCyc: BAMB398577:BAMMC406_0857-MONOMER - HAMAP: MF_00262 - InterPro: IPR005527 - TIGRFAMs: TIGR01215
Pfam domain/function: PF03776 MinE
EC number: NA
Molecular weight: Translated: 9439; Mature: 9308
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILSFLLGEKKKSASVAKERLQLIIAHERVGGRPPADYLPALQKELVAVISKYVRISND CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DIRVSLERQDDLEVLEVKIEIPQA CEEEEECCCCCCEEEEEEEECCCC >Mature Secondary Structure SILSFLLGEKKKSASVAKERLQLIIAHERVGGRPPADYLPALQKELVAVISKYVRISND HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DIRVSLERQDDLEVLEVKIEIPQA CEEEEECCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA