Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350900

Identifier: 115350900

GI number: 115350900

Start: 933042

End: 933443

Strand: Direct

Name: 115350900

Synonym: Bamb_0846

Alternate gene names: NA

Gene position: 933042-933443 (Clockwise)

Preceding gene: 115350899

Following gene: 115350901

Centisome position: 26.23

GC content: 69.9

Gene sequence:

>402_bases
ATGGCTGTCTCTGTTGTTCAACGTCGTATCGTTTCGCTCGCGCTGTTCGCCGCGGGCCTGTCAGCCGTCGCCGCGCCGCT
CGCTGCACGCGCGGACGAGATTCTCGTCGGCGCGCCGGTGTTGGTGCAATCGGGCCGGATGGTCGTCGCCGAACCGGTGG
CCGCGCCTGCCGAGGAAATCGTCGTCGTCGCGCCGAACGCGCCGCCGGCCGTGCGCTACGAGGTCGTGCCCGACGCGCGC
GTCGGCTATGTGTGGGAGCGCGGCCACTGGCACTGGGATCATGGTCGCTACGTGTGGATCGGCGGCCACTGGGAAGCCCA
GCGTGTCGGCATGCACTGGGTGCCGGGCCACTGGAATCAGCGCGGCCCGAACTGGTTCTGGACCCGCGGCCACTGGGCTT
GA

Upstream 100 bases:

>100_bases
GGGCTCGCCGTAACACGGTGTCTGTCGGCCGTTGGTCGACCTCCCGCATTGAACGAATACGCTCGCGTCGCTCGCGTCAT
TTCTCAATCAGGAGGTTGTG

Downstream 100 bases:

>100_bases
CGGAGGCGTGCAATGAAACGAACCGCCATTGCGATCGCACTCGTCGCGATCACGCTCGCCGGCTGTATCGTCGTGCCGGC
CCGGCCTGTCTACTATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAVSVVQRRIVSLALFAAGLSAVAAPLAARADEILVGAPVLVQSGRMVVAEPVAAPAEEIVVVAPNAPPAVRYEVVPDAR
VGYVWERGHWHWDHGRYVWIGGHWEAQRVGMHWVPGHWNQRGPNWFWTRGHWA

Sequences:

>Translated_133_residues
MAVSVVQRRIVSLALFAAGLSAVAAPLAARADEILVGAPVLVQSGRMVVAEPVAAPAEEIVVVAPNAPPAVRYEVVPDAR
VGYVWERGHWHWDHGRYVWIGGHWEAQRVGMHWVPGHWNQRGPNWFWTRGHWA
>Mature_132_residues
AVSVVQRRIVSLALFAAGLSAVAAPLAARADEILVGAPVLVQSGRMVVAEPVAAPAEEIVVVAPNAPPAVRYEVVPDARV
GYVWERGHWHWDHGRYVWIGGHWEAQRVGMHWVPGHWNQRGPNWFWTRGHWA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14750; Mature: 14619

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSVVQRRIVSLALFAAGLSAVAAPLAARADEILVGAPVLVQSGRMVVAEPVAAPAEEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCEEEECCCCCCCCCE
VVVAPNAPPAVRYEVVPDARVGYVWERGHWHWDHGRYVWIGGHWEAQRVGMHWVPGHWNQ
EEECCCCCCCEEEEECCCCCEEEEEECCCEECCCCEEEEECCCEEHEECCEEECCCCCCC
RGPNWFWTRGHWA
CCCCEEEECCCCC
>Mature Secondary Structure 
AVSVVQRRIVSLALFAAGLSAVAAPLAARADEILVGAPVLVQSGRMVVAEPVAAPAEEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCEEEECCCCCCCCCE
VVVAPNAPPAVRYEVVPDARVGYVWERGHWHWDHGRYVWIGGHWEAQRVGMHWVPGHWNQ
EEECCCCCCCEEEEECCCCCEEEEEECCCEECCCCEEEEECCCEEHEECCEEECCCCCCC
RGPNWFWTRGHWA
CCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA