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The map label for this gene is nudK [H]

Identifier: 115350856

GI number: 115350856

Start: 887974

End: 888579

Strand: Direct

Name: nudK [H]

Synonym: Bamb_0802

Alternate gene names: 115350856

Gene position: 887974-888579 (Clockwise)

Preceding gene: 115350854

Following gene: 115350857

Centisome position: 24.97

GC content: 66.17

Gene sequence:

>606_bases
ATGGCCGCAACGCAGGACCGCGTGCGCATCGTCGATACGACGGTGCTATCCGATGACTGGTATGTGCTGAAGAAGGTGAC
GTTCGATTTTCTGCGCCGCGATGGCACGTGGCAGCGGCTGAGCCGCGAAACCTATGACCGCGGCAACGGCGCGACCATCC
TGCTGCGCAACGCGGCGACGGGCGACGTGCTGCTCACGCGGCAGTTCCGGATGCCGGCGTTCGTCAACGGACACGACGGG
ATGCTGCTCGAAGCGGCCGCCGGCCTGCTCGACGACGCGACGCCCGACGCGCGCATTCGCGCGGAAGCCGAAGAGGAAAC
CGGCTATCGCGTGCGCGGCGTGCGCAAGGTGTTCGAGGCGTTCATGAGCCCAGGCTCGGTGACGGAGAAGCTGCATTTCT
TCGTCGGCGAATACGATGCGTCGTTGCGCACGGGCGACGGCGGCGGCATCGCGGAAGAAGGCGAGGATCTCGAGGTCGTC
GAGATGCCGCTGCACGCGGCGCTGGATGCCGTCGAGCGCGGTGAAATTGTCGACGCGAAGACGATCATGCTGCTGCAGTA
CGTCGCGTTGCGGGAACCCGAGGGCATGCGCACTGCGACTGCGTGA

Upstream 100 bases:

>100_bases
TGCGTTGGGTCGTCAGCATCGGGTATGCACGAATTTTCTTGAAATTGCACGAATATGCACGTTACCATGGGCGCCGTCAT
ATGTCGAATGGGAGGCCGCC

Downstream 100 bases:

>100_bases
TGCCGCGTCACGGTGCTGGAACGGGCGTAAGATCGCGCGATGCCCGTCCGGCACCGTTCGACGCCACCACCGCTCCATCA
TGCCGTTTTCCGATTCAGCC

Product: nucleoside diphosphate pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAATQDRVRIVDTTVLSDDWYVLKKVTFDFLRRDGTWQRLSRETYDRGNGATILLRNAATGDVLLTRQFRMPAFVNGHDG
MLLEAAAGLLDDATPDARIRAEAEEETGYRVRGVRKVFEAFMSPGSVTEKLHFFVGEYDASLRTGDGGGIAEEGEDLEVV
EMPLHAALDAVERGEIVDAKTIMLLQYVALREPEGMRTATA

Sequences:

>Translated_201_residues
MAATQDRVRIVDTTVLSDDWYVLKKVTFDFLRRDGTWQRLSRETYDRGNGATILLRNAATGDVLLTRQFRMPAFVNGHDG
MLLEAAAGLLDDATPDARIRAEAEEETGYRVRGVRKVFEAFMSPGSVTEKLHFFVGEYDASLRTGDGGGIAEEGEDLEVV
EMPLHAALDAVERGEIVDAKTIMLLQYVALREPEGMRTATA
>Mature_200_residues
AATQDRVRIVDTTVLSDDWYVLKKVTFDFLRRDGTWQRLSRETYDRGNGATILLRNAATGDVLLTRQFRMPAFVNGHDGM
LLEAAAGLLDDATPDARIRAEAEEETGYRVRGVRKVFEAFMSPGSVTEKLHFFVGEYDASLRTGDGGGIAEEGEDLEVVE
MPLHAALDAVERGEIVDAKTIMLLQYVALREPEGMRTATA

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=183, Percent_Identity=49.7267759562842, Blast_Score=188, Evalue=2e-49,
Organism=Escherichia coli, GI1789412, Length=155, Percent_Identity=31.6129032258064, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22285; Mature: 22154

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATQDRVRIVDTTVLSDDWYVLKKVTFDFLRRDGTWQRLSRETYDRGNGATILLRNAAT
CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCC
GDVLLTRQFRMPAFVNGHDGMLLEAAAGLLDDATPDARIRAEAEEETGYRVRGVRKVFEA
CCEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
FMSPGSVTEKLHFFVGEYDASLRTGDGGGIAEEGEDLEVVEMPLHAALDAVERGEIVDAK
HCCCCCHHHHHHHHEEECCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHH
TIMLLQYVALREPEGMRTATA
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AATQDRVRIVDTTVLSDDWYVLKKVTFDFLRRDGTWQRLSRETYDRGNGATILLRNAAT
CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCC
GDVLLTRQFRMPAFVNGHDGMLLEAAAGLLDDATPDARIRAEAEEETGYRVRGVRKVFEA
CCEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
FMSPGSVTEKLHFFVGEYDASLRTGDGGGIAEEGEDLEVVEMPLHAALDAVERGEIVDAK
HCCCCCHHHHHHHHEEECCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHH
TIMLLQYVALREPEGMRTATA
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA