Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350816

Identifier: 115350816

GI number: 115350816

Start: 846777

End: 848045

Strand: Direct

Name: 115350816

Synonym: Bamb_0762

Alternate gene names: NA

Gene position: 846777-848045 (Clockwise)

Preceding gene: 115350815

Following gene: 115350817

Centisome position: 23.81

GC content: 63.67

Gene sequence:

>1269_bases
ATGAGTCGGGACATGAAGAAACTGCTGGTGCTGGCTCCCCGGTTTCCCTACCCGGTAATCGGCGGAGACAAGTTGCGGAT
CTATCACCTGTGTCGGGTGCTGTCTCGTCACTACTCGCTGACGTTGCTGAGCCTGTGCGAGGCCGAAGAAGAGCTGCACG
CCGAACTGCCTGACGACGGCGTTTTCGATCGGGTCGAACGGGTCTATCTGCCGCGCTGGCGCTCCTACGTCAATACGTTG
TTCGCGTTGCCTACGCGCACACCGTTGCAGGTGGCGTACTACCGGAGCAGGGCGTTTGCGGCGGCCGTCTCCCGGCTGCT
GCCGTCGCACGACGGCGCATTGGTTCATCTCGTGCGTTGCGCCGAGTACGTGCGCAGGTCGGACAAGCCGCGCATCCTCG
AGATGACTGACGCGATCTCGCTCAATTACAGTCGTGTCAAGCAGCTCCGGAATGCGCGCGGGCTCAAGTCGCGTGTGTTC
GGTATCGAGGCGAAGCGTCTGCTCGACTACGAGCGTGCCATCGTCGACGATTTCGACCTGTCGGTGCTGGTTTCGAAGAC
CGACCGCGACTATCTGTTTCCCGGTGCATCCGCGACGAATGTGATGGTTTGCTCCAATGGCGTGGATCTGTCGGGACTGC
CGTATACGGTGCGGAATATGTCGAGCCGGGTCCTGATCTTCATCGGCGACATGCGCACGGTACAGAACCAGGACATGTGC
CATTTCTTTGCGGAGACCGTGCTGCCGCTGCTGCGCAAGCGTGGCGATTATCGCTTCCGGCTCGTAGGCTCCATCGCGCC
CGCGCTGGCCGAGCGGTTTCGTGCGTACGATGGTGTGGAGGTGACGGGGCGGGTCGCGTCGGTCGCGGAGGCAGCGTCCG
ACGGGGCCGTCGGTGTATGCCCGATGCGTATCGGTGCGGGCGTGCAAAACAAGATCCTCGAATACATGGCGCTTGGTTTG
CCAGTCGTCACCACGTCGCTGGGACACGAGGGCCTGCGCGCGAAGTGCGGCGAGGAGCTGCTGATCGCGGATACGCCGGA
AGAATTTGTCGAGCGCATCGAGCAGGTCGTTGCCGACGAGGCTTCCGCGGTCGAGATGGCGCGGCGTGCGCGGGCATTCG
TCGAGCGAGAGCATGGATGGGAGCGGATGGTCGCGCCCCTCGTCGAGAAGGTCGACGCGTTGCTGGCCATGCCGGCGCCA
ACCGGGGCTCGCGGCGATCTCGCGTCTTCTTGCGACGACGCCAGCCGGTCCGACGGGAGGCTGCGATGA

Upstream 100 bases:

>100_bases
CGCGATTCGAGGTCGCGCTCGGCGATGGCGTGAATCGGGCTCGCACGTACTCGGAGTCCGCGGTGCGTCCGTCGATCGAG
GATTTTTGGGCGGGTCTCGC

Downstream 100 bases:

>100_bases
TGCGCCTGGTCATCACTGGCGCGAACGGCTTCGTCGGCCGGGCCGTCTGCCGTCGCGCGCTGGACGCCGGGCATACCGTT
ACCGCGCTGGTGCGACGCCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Sugar Transferase; A-Glycosyltransferase; Mannosyl Transferase WbaD; Glycosyl Transferase Protein; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Glycosyltransferase Family 4 Protein; Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSRDMKKLLVLAPRFPYPVIGGDKLRIYHLCRVLSRHYSLTLLSLCEAEEELHAELPDDGVFDRVERVYLPRWRSYVNTL
FALPTRTPLQVAYYRSRAFAAAVSRLLPSHDGALVHLVRCAEYVRRSDKPRILEMTDAISLNYSRVKQLRNARGLKSRVF
GIEAKRLLDYERAIVDDFDLSVLVSKTDRDYLFPGASATNVMVCSNGVDLSGLPYTVRNMSSRVLIFIGDMRTVQNQDMC
HFFAETVLPLLRKRGDYRFRLVGSIAPALAERFRAYDGVEVTGRVASVAEAASDGAVGVCPMRIGAGVQNKILEYMALGL
PVVTTSLGHEGLRAKCGEELLIADTPEEFVERIEQVVADEASAVEMARRARAFVEREHGWERMVAPLVEKVDALLAMPAP
TGARGDLASSCDDASRSDGRLR

Sequences:

>Translated_422_residues
MSRDMKKLLVLAPRFPYPVIGGDKLRIYHLCRVLSRHYSLTLLSLCEAEEELHAELPDDGVFDRVERVYLPRWRSYVNTL
FALPTRTPLQVAYYRSRAFAAAVSRLLPSHDGALVHLVRCAEYVRRSDKPRILEMTDAISLNYSRVKQLRNARGLKSRVF
GIEAKRLLDYERAIVDDFDLSVLVSKTDRDYLFPGASATNVMVCSNGVDLSGLPYTVRNMSSRVLIFIGDMRTVQNQDMC
HFFAETVLPLLRKRGDYRFRLVGSIAPALAERFRAYDGVEVTGRVASVAEAASDGAVGVCPMRIGAGVQNKILEYMALGL
PVVTTSLGHEGLRAKCGEELLIADTPEEFVERIEQVVADEASAVEMARRARAFVEREHGWERMVAPLVEKVDALLAMPAP
TGARGDLASSCDDASRSDGRLR
>Mature_421_residues
SRDMKKLLVLAPRFPYPVIGGDKLRIYHLCRVLSRHYSLTLLSLCEAEEELHAELPDDGVFDRVERVYLPRWRSYVNTLF
ALPTRTPLQVAYYRSRAFAAAVSRLLPSHDGALVHLVRCAEYVRRSDKPRILEMTDAISLNYSRVKQLRNARGLKSRVFG
IEAKRLLDYERAIVDDFDLSVLVSKTDRDYLFPGASATNVMVCSNGVDLSGLPYTVRNMSSRVLIFIGDMRTVQNQDMCH
FFAETVLPLLRKRGDYRFRLVGSIAPALAERFRAYDGVEVTGRVASVAEAASDGAVGVCPMRIGAGVQNKILEYMALGLP
VVTTSLGHEGLRAKCGEELLIADTPEEFVERIEQVVADEASAVEMARRARAFVEREHGWERMVAPLVEKVDALLAMPAPT
GARGDLASSCDDASRSDGRLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47113; Mature: 46982

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDMKKLLVLAPRFPYPVIGGDKLRIYHLCRVLSRHYSLTLLSLCEAEEELHAELPDDG
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VFDRVERVYLPRWRSYVNTLFALPTRTPLQVAYYRSRAFAAAVSRLLPSHDGALVHLVRC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AEYVRRSDKPRILEMTDAISLNYSRVKQLRNARGLKSRVFGIEAKRLLDYERAIVDDFDL
HHHHHCCCCCCEEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SVLVSKTDRDYLFPGASATNVMVCSNGVDLSGLPYTVRNMSSRVLIFIGDMRTVQNQDMC
EEEEECCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCHHHCCCHHH
HFFAETVLPLLRKRGDYRFRLVGSIAPALAERFRAYDGVEVTGRVASVAEAASDGAVGVC
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
PMRIGAGVQNKILEYMALGLPVVTTSLGHEGLRAKCGEELLIADTPEEFVERIEQVVADE
HHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHCC
ASAVEMARRARAFVEREHGWERMVAPLVEKVDALLAMPAPTGARGDLASSCDDASRSDGR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC
LR
CC
>Mature Secondary Structure 
SRDMKKLLVLAPRFPYPVIGGDKLRIYHLCRVLSRHYSLTLLSLCEAEEELHAELPDDG
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
VFDRVERVYLPRWRSYVNTLFALPTRTPLQVAYYRSRAFAAAVSRLLPSHDGALVHLVRC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AEYVRRSDKPRILEMTDAISLNYSRVKQLRNARGLKSRVFGIEAKRLLDYERAIVDDFDL
HHHHHCCCCCCEEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SVLVSKTDRDYLFPGASATNVMVCSNGVDLSGLPYTVRNMSSRVLIFIGDMRTVQNQDMC
EEEEECCCCCEECCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCHHHCCCHHH
HFFAETVLPLLRKRGDYRFRLVGSIAPALAERFRAYDGVEVTGRVASVAEAASDGAVGVC
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
PMRIGAGVQNKILEYMALGLPVVTTSLGHEGLRAKCGEELLIADTPEEFVERIEQVVADE
HHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHCCCCEEEECCHHHHHHHHHHHHHCC
ASAVEMARRARAFVEREHGWERMVAPLVEKVDALLAMPAPTGARGDLASSCDDASRSDGR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCC
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA