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The map label for this gene is galE [H]

Identifier: 115350817

GI number: 115350817

Start: 848045

End: 849007

Strand: Direct

Name: galE [H]

Synonym: Bamb_0763

Alternate gene names: 115350817

Gene position: 848045-849007 (Clockwise)

Preceding gene: 115350816

Following gene: 115350818

Centisome position: 23.84

GC content: 69.37

Gene sequence:

>963_bases
ATGCGCCTGGTCATCACTGGCGCGAACGGCTTCGTCGGCCGGGCCGTCTGCCGTCGCGCGCTGGACGCCGGGCATACCGT
TACCGCGCTGGTGCGACGCCCTGGCGCATGCATCGACGGCGTGCGCGAATGGGTGCACGGCAGCGCCGATTGGGAGGGGC
TCGACGCGGCCTGGCCCGCCGACCTCGTCGCCGATTGCGTGATCCATCTCGCCGCACGCGTACATGTGATGCGCGACGAT
TCGCCCGATCCCGACGCCGCATTTGATGCGACCAATGTCGCGGGCACGCTGCGTCTCGCCGAAGCCGCGCGCAAGTACGG
CGTGCGCCGAATCGTATATGCGAGCAGCATCAAGGCGGTCGGCGAGAGCGACAGCGGGGCGCCGCTGTCGGAAAGCTGGC
CCGCCGACCCGCAAGACGCATACGGCCGCTCGAAGCTGCGTGCCGAGCAGCAACTCGCGCGGTTCGGCACGTCGGCCGGG
CTCGACGTCGTCATCGTGCGTCCGCCGCTGGTCTATGGCCCGCATGTCACCGCCAATTTCCTGCGGATGATGGACGCGGT
TGCACGCGGGATGCCGCTACCGCTCGGTTCCATCTCCGCTCGCCGCAGCATCGTCTACGTCGACAACCTGGCCGACGCGC
TGCTACAGTGCGCGACCGACCCGCGGGCGGCCGGCGAGTGCTTCCACGTTGCCGACGACGATGCGCCGTCGGTTACCGGC
CTGCTGCGTCTGGTGGGCGATGCCCTCGGCAAACCGGCGCGGCTGCTGCCGGTCCCCACGGCGGCACTACGCGCGCTCGG
CAAGCTGACCGGCCGCAGCGCGACGATCGACCGCCTGACAGGCAGCCTGCAACTCGACACGGGCCGCATCAAGCGCGTAC
TGGGCTGGCAACCGCCGTATACGACTCGTCAGGGCCTCGAAGCGACCGCGGCATGGTATCGTTCGCGCGATATACAACAG
TAG

Upstream 100 bases:

>100_bases
AGGTCGACGCGTTGCTGGCCATGCCGGCGCCAACCGGGGCTCGCGGCGATCTCGCGTCTTCTTGCGACGACGCCAGCCGG
TCCGACGGGAGGCTGCGATG

Downstream 100 bases:

>100_bases
CCGACATGCCTCTCCCGATATCCACGTGGCCCGCCGTGATCGCGGTGGCGCTGGTCGCTGCCGTCGCATCGACGGCCATC
CTGCGCATGCTGCTCGCGAC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRLVITGANGFVGRAVCRRALDAGHTVTALVRRPGACIDGVREWVHGSADWEGLDAAWPADLVADCVIHLAARVHVMRDD
SPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAVGESDSGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAG
LDVVIVRPPLVYGPHVTANFLRMMDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDAPSVTG
LLRLVGDALGKPARLLPVPTAALRALGKLTGRSATIDRLTGSLQLDTGRIKRVLGWQPPYTTRQGLEATAAWYRSRDIQQ

Sequences:

>Translated_320_residues
MRLVITGANGFVGRAVCRRALDAGHTVTALVRRPGACIDGVREWVHGSADWEGLDAAWPADLVADCVIHLAARVHVMRDD
SPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAVGESDSGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAG
LDVVIVRPPLVYGPHVTANFLRMMDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDAPSVTG
LLRLVGDALGKPARLLPVPTAALRALGKLTGRSATIDRLTGSLQLDTGRIKRVLGWQPPYTTRQGLEATAAWYRSRDIQQ
>Mature_320_residues
MRLVITGANGFVGRAVCRRALDAGHTVTALVRRPGACIDGVREWVHGSADWEGLDAAWPADLVADCVIHLAARVHVMRDD
SPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAVGESDSGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAG
LDVVIVRPPLVYGPHVTANFLRMMDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDAPSVTG
LLRLVGDALGKPARLLPVPTAALRALGKLTGRSATIDRLTGSLQLDTGRIKRVLGWQPPYTTRQGLEATAAWYRSRDIQQ

Specific function: DTDP-L-RHAMNOSE BIOSYNTHESIS WITHIN THE O ANTIGEN BIOSYNTHESIS PATHWAY OF LIPOPOLYSACCHARIDE BIOSYNTHESIS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994969, Length=342, Percent_Identity=27.4853801169591, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081792, Length=339, Percent_Identity=25.6637168141593, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786974, Length=166, Percent_Identity=31.9277108433735, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321437, Length=274, Percent_Identity=25.9124087591241, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34218; Mature: 34218

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVITGANGFVGRAVCRRALDAGHTVTALVRRPGACIDGVREWVHGSADWEGLDAAWPA
CEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DLVADCVIHLAARVHVMRDDSPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAV
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GESDSGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAGLDVVIVRPPLVYGPHVTANF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHH
LRMMDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDAPSVTG
HHHHHHHHCCCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHH
LLRLVGDALGKPARLLPVPTAALRALGKLTGRSATIDRLTGSLQLDTGRIKRVLGWQPPY
HHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHCCCEEECHHHHHHHHCCCCCC
TTRQGLEATAAWYRSRDIQQ
CCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLVITGANGFVGRAVCRRALDAGHTVTALVRRPGACIDGVREWVHGSADWEGLDAAWPA
CEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCH
DLVADCVIHLAARVHVMRDDSPDPDAAFDATNVAGTLRLAEAARKYGVRRIVYASSIKAV
HHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
GESDSGAPLSESWPADPQDAYGRSKLRAEQQLARFGTSAGLDVVIVRPPLVYGPHVTANF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHH
LRMMDAVARGMPLPLGSISARRSIVYVDNLADALLQCATDPRAAGECFHVADDDAPSVTG
HHHHHHHHCCCCCCCCCHHHCCEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHH
LLRLVGDALGKPARLLPVPTAALRALGKLTGRSATIDRLTGSLQLDTGRIKRVLGWQPPY
HHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCHHHHHHCCCEEECHHHHHHHHCCCCCC
TTRQGLEATAAWYRSRDIQQ
CCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]