Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350804

Identifier: 115350804

GI number: 115350804

Start: 831404

End: 832264

Strand: Direct

Name: 115350804

Synonym: Bamb_0750

Alternate gene names: NA

Gene position: 831404-832264 (Clockwise)

Preceding gene: 115350803

Following gene: 115350805

Centisome position: 23.38

GC content: 54.01

Gene sequence:

>861_bases
ATGAGGTGGGGAGGTGCGTCGCCGATTGAAGCGACTGTGCGAGACCTTTCGTTATCTAGAATATATATGCGAGTTACAGG
AGATAGTTTGTCCACCAACGCTCAGGATTGCCCATCTAGTGAAATTTTGCGTATCGCGGTGGTGAGTTCCCCGCGGAGCG
GGAATTCATGGATCAGATCAACGCTCGCTGGCGCATTGTCCATGCAGGAGATCGCGATTCACAATTATCTCGATGCTCCG
GCCGTTTTACCGCAGAGGTGTTTTCTTCAGATCCATTGGTATCGCGAGCCGAACTTTCAAGCGTGGCTTCGCGAAAATCA
ATTTCGGGTATTGACGGTAGCAAGACATCCGCTCGACGTTCTTGTGTCGGCGCTGCACTACATTCGATACGAACCGGGAA
CGAGCCGATGGCTTGAGGGGAATGTAAAATTGCCCGGGGAATTGGCGAACGCCAGCCCGTCCTCCCCCGAATTTCTTGAA
TACGCTCTTGGCATGGGCGCCGAAGATCTGCTTTCGATCACCTATCAATGGTGGAACGATCCCGAGGTGCTTCGCCTTCG
ATACGAAGATGCCGTTGCGAACCCTGAAGTAGTGCTTGGCAATCAAATCGCTGCATTAGGGGGCAGTGCCCAGGACGTTG
TTCCCTGGCTGGCGCGCCTCAGTATCGACAAAATGCGTGCGACGCCGAACCGTCACGGATGGCAAGGAAGCCCCGGGCTT
TGGCGCCGCTTGATTGTCCCTCAAGACGCCATTCGCATCTACAGAAGGCACCGAAGAATTTTTGATACCTTGGGCTATAC
GATTCGGCCGTACTTTCTGACGCGTGCGTCGGCCTATCGTAACTGGATGGAGCGACTTTAG

Upstream 100 bases:

>100_bases
ATTCCGACACAGGCCGGCGATACGAGCGTGGGGAAGCAGCGACGCAACTGGCGGGGCCACGGCCAAGACTTCCGCTGTCA
GTGCACTGTCGTGGTACAGG

Downstream 100 bases:

>100_bases
TGGCGATGCTTACTGAATGGTCGTATTTCATCACGTCACGGCTGGTGTATGCCTAGCGAATTCCCGTTCGTCCAATAAGG
CGGGGGCTATATGTTTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRWGGASPIEATVRDLSLSRIYMRVTGDSLSTNAQDCPSSEILRIAVVSSPRSGNSWIRSTLAGALSMQEIAIHNYLDAP
AVLPQRCFLQIHWYREPNFQAWLRENQFRVLTVARHPLDVLVSALHYIRYEPGTSRWLEGNVKLPGELANASPSSPEFLE
YALGMGAEDLLSITYQWWNDPEVLRLRYEDAVANPEVVLGNQIAALGGSAQDVVPWLARLSIDKMRATPNRHGWQGSPGL
WRRLIVPQDAIRIYRRHRRIFDTLGYTIRPYFLTRASAYRNWMERL

Sequences:

>Translated_286_residues
MRWGGASPIEATVRDLSLSRIYMRVTGDSLSTNAQDCPSSEILRIAVVSSPRSGNSWIRSTLAGALSMQEIAIHNYLDAP
AVLPQRCFLQIHWYREPNFQAWLRENQFRVLTVARHPLDVLVSALHYIRYEPGTSRWLEGNVKLPGELANASPSSPEFLE
YALGMGAEDLLSITYQWWNDPEVLRLRYEDAVANPEVVLGNQIAALGGSAQDVVPWLARLSIDKMRATPNRHGWQGSPGL
WRRLIVPQDAIRIYRRHRRIFDTLGYTIRPYFLTRASAYRNWMERL
>Mature_286_residues
MRWGGASPIEATVRDLSLSRIYMRVTGDSLSTNAQDCPSSEILRIAVVSSPRSGNSWIRSTLAGALSMQEIAIHNYLDAP
AVLPQRCFLQIHWYREPNFQAWLRENQFRVLTVARHPLDVLVSALHYIRYEPGTSRWLEGNVKLPGELANASPSSPEFLE
YALGMGAEDLLSITYQWWNDPEVLRLRYEDAVANPEVVLGNQIAALGGSAQDVVPWLARLSIDKMRATPNRHGWQGSPGL
WRRLIVPQDAIRIYRRHRRIFDTLGYTIRPYFLTRASAYRNWMERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32674; Mature: 32674

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWGGASPIEATVRDLSLSRIYMRVTGDSLSTNAQDCPSSEILRIAVVSSPRSGNSWIRS
CCCCCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH
TLAGALSMQEIAIHNYLDAPAVLPQRCFLQIHWYREPNFQAWLRENQFRVLTVARHPLDV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHCCCCEEEEEEECCCHHH
LVSALHYIRYEPGTSRWLEGNVKLPGELANASPSSPEFLEYALGMGAEDLLSITYQWWND
HHHHHHHHCCCCCCCCEEECCCCCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
PEVLRLRYEDAVANPEVVLGNQIAALGGSAQDVVPWLARLSIDKMRATPNRHGWQGSPGL
CCEEEEEEHHHCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WRRLIVPQDAIRIYRRHRRIFDTLGYTIRPYFLTRASAYRNWMERL
HHHHCCCHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWGGASPIEATVRDLSLSRIYMRVTGDSLSTNAQDCPSSEILRIAVVSSPRSGNSWIRS
CCCCCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHH
TLAGALSMQEIAIHNYLDAPAVLPQRCFLQIHWYREPNFQAWLRENQFRVLTVARHPLDV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHHCCCCEEEEEEECCCHHH
LVSALHYIRYEPGTSRWLEGNVKLPGELANASPSSPEFLEYALGMGAEDLLSITYQWWND
HHHHHHHHCCCCCCCCEEECCCCCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC
PEVLRLRYEDAVANPEVVLGNQIAALGGSAQDVVPWLARLSIDKMRATPNRHGWQGSPGL
CCEEEEEEHHHCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
WRRLIVPQDAIRIYRRHRRIFDTLGYTIRPYFLTRASAYRNWMERL
HHHHCCCHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA