Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350784

Identifier: 115350784

GI number: 115350784

Start: 810931

End: 811563

Strand: Direct

Name: 115350784

Synonym: Bamb_0730

Alternate gene names: NA

Gene position: 810931-811563 (Clockwise)

Preceding gene: 115350783

Following gene: 115350785

Centisome position: 22.8

GC content: 69.19

Gene sequence:

>633_bases
ATGATTGCCGCATTGCTGGCCGCGAGCCTGATAGGAGCGAGCATGACAGCCGACCCGGTGACCGTTGCGCAGGCACATTT
CGACCAGGTCCGCTCGTACCGCGCGACGATCCGCTCGTCGGCGCGAAGCGGCGAGCGCACCGAATTCCACTATGCGTACC
TGAAACCCGGTTTCGTCCGGATGGACTTCGTGTCGCCCCATCGTGGCGCGGTGCTCGCGTACGATCCCGGCGACGGCAAG
GTCCGGCTGCGCCCGTTCGGCGAGCATGCGCCGCCCGCGCTGAGGCTATCGCCGACCAATCCGCTCGTGCGCGACCGCAG
CGGTCATCGCGTCGACCGCTCGGACGTCGGCGAGCTGCTGCGCAACGTGCATGCGCTGCAGCAGGGCGGCGCGACGGTCA
CGGAGGGCGAGGAGACCATCAACGGGCGGACCACGCTGCGCGTGTCGGTGACGGGCGCGCCCGCGCACGCGGTCGACGGC
GTGCATCGCTACCGGCTGTGGCTGGACACCGAGGACGGTTTTCCGCTGAAGGTCGTCAGCTTCGCGGACGGTGACGGCGA
CCCGCTCGAAACGGTGACGCTCGACGACGTCGAGATCGACGTCGCGTTTCCCGCCCGCTTCTTCGCGCCCTGA

Upstream 100 bases:

>100_bases
AGCCCGGTCGCTTCGCCTACTATTGCACGCATCGGCTGCTGTTCTTGCGCAGCCATCGCGAACGCGGCATGGAGGGCGTG
CTCGACGTCGAGGCGGCGCC

Downstream 100 bases:

>100_bases
TCCCTCATCCCTGATTCCTGATCCCGACTCATGCCGGAGGCTGCATGGCGGAATACCGGTTTTCGACGACGTGGCGCGTG
GACGCGCCGCTCACGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK
VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG
VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP

Sequences:

>Translated_210_residues
MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK
VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG
VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP
>Mature_210_residues
MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVRMDFVSPHRGAVLAYDPGDGK
VRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELLRNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDG
VHRYRLWLDTEDGFPLKVVSFADGDGDPLETVTLDDVEIDVAFPARFFAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22831; Mature: 22831

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVR
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE
MDFVSPHRGAVLAYDPGDGKVRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELL
EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHH
RNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDGVHRYRLWLDTEDGFPLKVVS
HHHHHHHHCCCEEECCCCCCCCEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCEEEEE
FADGDGDPLETVTLDDVEIDVAFPARFFAP
ECCCCCCCEEEEEECCEEEEEECCHHHCCC
>Mature Secondary Structure
MIAALLAASLIGASMTADPVTVAQAHFDQVRSYRATIRSSARSGERTEFHYAYLKPGFVR
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEE
MDFVSPHRGAVLAYDPGDGKVRLRPFGEHAPPALRLSPTNPLVRDRSGHRVDRSDVGELL
EEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHH
RNVHALQQGGATVTEGEETINGRTTLRVSVTGAPAHAVDGVHRYRLWLDTEDGFPLKVVS
HHHHHHHHCCCEEECCCCCCCCEEEEEEEEECCCHHHHCCCEEEEEEEECCCCCCEEEEE
FADGDGDPLETVTLDDVEIDVAFPARFFAP
ECCCCCCCEEEEEECCEEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA