| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is yqeB [C]
Identifier: 115350767
GI number: 115350767
Start: 794518
End: 795180
Strand: Direct
Name: yqeB [C]
Synonym: Bamb_0713
Alternate gene names: 115350767
Gene position: 794518-795180 (Clockwise)
Preceding gene: 115350766
Following gene: 115350768
Centisome position: 22.34
GC content: 72.85
Gene sequence:
>663_bases ATGAACGCACCTGTTCCCTCGCCGAATGCCGCGTCGCATGCACCCGTCGCCGGGTGCGACGGCGCGTGCGGCGCATCACC CGCGCAGACGTTCGCGCAAGGCACCGGCCGGCGCAACCGCGCGAGCGCCGCGCCGCCGCCGATGCACATCGTGCTGTTCG GCGCGGGGCATGTCGGCCACGCGCTCGTCACGCTGCTCGGCGCGTTGCCGTGCGTCGTGCAGTGGGTCGACACGCGCGAC GAGCTGTTCCCGGACGAATGTCCGCCGAACGTGCAGCCGGAGCCGACCGACACGCCCGAGGCCGTCGTCGACGCGGCGCC GCCTGGCGCGTACTTCCTCGTGATGACGCACAACCACGCGCTCGACTTCTCGCTCGCCTCGCAGATCATGCGGCGGCGCG ACTTCGCGTACTTCGGGATGATCGGCTCGCGCACCAAGCGCGTGAAGTTCGAGCGCCGGCTCGCCGCGCGCGGCGTCGAT CCGGCGCGGCTCACGGAGATGGTGTGCCCGATCGGCATCGCGGGCATCGTCGACAAGGCGCCCGGCGCGATCGCGGTGGC CGTCTGCGCGGAACTGCTGCAGGCGCGCTCGGGCACGCCGGTGGCCGATGTGAAGGCGACCGCGGCCGGCCGCGTGCGCG ACGACGTAAGCTGCGCGCGGTAA
Upstream 100 bases:
>100_bases CGCGCGGGCAGGTTGAGATGAAACGACGCCCATGCTCACTTCATTCGCTGCTTCCCGAGGAGGCGGTCAGCCACCTTGGG CCGGCTCGGCGGAGGCTGAC
Downstream 100 bases:
>100_bases CGACGAGGGCCGCTGCACCCGACGCGCGCTCGCGCATTTTTGCCTACACTGCACGGATCGCGCGGCATCGGGCCGCGCGT CTTTCGTGCAGGTACCATGT
Product: xanthine and Co dehydrogenase maturation factor
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine Dehydrogenase Accessory Factor; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; XdhC Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; MPT Insertase; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNAPVPSPNAASHAPVAGCDGACGASPAQTFAQGTGRRNRASAAPPPMHIVLFGAGHVGHALVTLLGALPCVVQWVDTRD ELFPDECPPNVQPEPTDTPEAVVDAAPPGAYFLVMTHNHALDFSLASQIMRRRDFAYFGMIGSRTKRVKFERRLAARGVD PARLTEMVCPIGIAGIVDKAPGAIAVAVCAELLQARSGTPVADVKATAAGRVRDDVSCAR
Sequences:
>Translated_220_residues MNAPVPSPNAASHAPVAGCDGACGASPAQTFAQGTGRRNRASAAPPPMHIVLFGAGHVGHALVTLLGALPCVVQWVDTRD ELFPDECPPNVQPEPTDTPEAVVDAAPPGAYFLVMTHNHALDFSLASQIMRRRDFAYFGMIGSRTKRVKFERRLAARGVD PARLTEMVCPIGIAGIVDKAPGAIAVAVCAELLQARSGTPVADVKATAAGRVRDDVSCAR >Mature_220_residues MNAPVPSPNAASHAPVAGCDGACGASPAQTFAQGTGRRNRASAAPPPMHIVLFGAGHVGHALVTLLGALPCVVQWVDTRD ELFPDECPPNVQPEPTDTPEAVVDAAPPGAYFLVMTHNHALDFSLASQIMRRRDFAYFGMIGSRTKRVKFERRLAARGVD PARLTEMVCPIGIAGIVDKAPGAIAVAVCAELLQARSGTPVADVKATAAGRVRDDVSCAR
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22984; Mature: 22984
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVPSPNAASHAPVAGCDGACGASPAQTFAQGTGRRNRASAAPPPMHIVLFGAGHVGH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHH ALVTLLGALPCVVQWVDTRDELFPDECPPNVQPEPTDTPEAVVDAAPPGAYFLVMTHNHA HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCC LDFSLASQIMRRRDFAYFGMIGSRTKRVKFERRLAARGVDPARLTEMVCPIGIAGIVDKA CCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCC PGAIAVAVCAELLQARSGTPVADVKATAAGRVRDDVSCAR CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNAPVPSPNAASHAPVAGCDGACGASPAQTFAQGTGRRNRASAAPPPMHIVLFGAGHVGH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHH ALVTLLGALPCVVQWVDTRDELFPDECPPNVQPEPTDTPEAVVDAAPPGAYFLVMTHNHA HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCC LDFSLASQIMRRRDFAYFGMIGSRTKRVKFERRLAARGVDPARLTEMVCPIGIAGIVDKA CCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCC PGAIAVAVCAELLQARSGTPVADVKATAAGRVRDDVSCAR CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA