Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350741

Identifier: 115350741

GI number: 115350741

Start: 765709

End: 766548

Strand: Direct

Name: 115350741

Synonym: Bamb_0687

Alternate gene names: NA

Gene position: 765709-766548 (Clockwise)

Preceding gene: 115350740

Following gene: 115350742

Centisome position: 21.53

GC content: 68.57

Gene sequence:

>840_bases
ATGCCGTTGAACGCTGATCGCCGCAGCCGCGCGCATACGCTGCTCGAAGTACTGATCGCGATGATCGTCGGTCTGCTCGT
GCTTGCCGCGGCCGGTGCGCTGTATCACGCGCAGCGCGTCGCGCAGCGGCGGGCGGAAGACGGATTCCGGATGCGCGATG
CGGCCGCGATCGCACTGATGCTGATCGGCCAGCAGATCCAGATGGCCGGGTTTCGGCCGCTCGATGTCGAAGGCGCGTCG
TCGTTGCCGCCGGTGTTCGGCTGTTCAGCGGGCCGCGTGCGAGGCGATGGCGCGCAGGTGCGCTGCGAACCCGTGCGCGC
GGCGTCGGATGCGGTACTGGTCCGGTATGTCGGCGATCCCGTATCGACGTGGCCGACCAGCAGCGCACAGGTGTCGGATT
GTCTCGGGCAGGGTGTCGGCGCCCCGGGTGAGCGGCCACTCGTGGAAAACCGTTTCGACGCGCATGTCAGCCCGTCGACG
GGCGAGCCCGAACTGTACTGCGAGGGAAGCGGGCGTCCGGGCACGCCGCAACCGGTCGTGTCCGGAATCGACCAGCTGCG
CGTGCGTTACCTGCGTCGCGACGGCGCCCAGTTCGTCGATGCACAGGCGATGGGTGCCGATGACTGGCGCGATGTCGTCG
CCGTGCATGTGTGCGTGCGGGCGCGTGGCGAACCGATGCCCGAGGCCGCGCGTCATGTCGATTGCGACGGCCGCACGACC
ATTGCGCCGGAGGGTCGGGCGCATCTGGTGCTGCATCGAATCGTCGCGATGCGGAATTCCGCGATCGCATTCGCCGATCC
TGTTCGTGACGCGGCAACGGCCCACGAGGCGTTGCGATGA

Upstream 100 bases:

>100_bases
CGCGGTGCGGGCGCGGCGGTATCGACGCGATGCGAAGGCGCGGGGGCGACGGTGACGCCGCCGTCGTGCGTACGGATTCC
GTTTCGGGAGGTCGAGGTCG

Downstream 100 bases:

>100_bases
TTCACGCAAACGGGTTCGTCGGCGACCTTGCGATGCGAATAGCGGCCGGAGGTGCGAGAAGGCGCGCCGTGGCGCCCTGC
GACATGCAGCGCGCGCCGGA

Product: prepilin-type cleavage/methylation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPLNADRRSRAHTLLEVLIAMIVGLLVLAAAGALYHAQRVAQRRAEDGFRMRDAAAIALMLIGQQIQMAGFRPLDVEGAS
SLPPVFGCSAGRVRGDGAQVRCEPVRAASDAVLVRYVGDPVSTWPTSSAQVSDCLGQGVGAPGERPLVENRFDAHVSPST
GEPELYCEGSGRPGTPQPVVSGIDQLRVRYLRRDGAQFVDAQAMGADDWRDVVAVHVCVRARGEPMPEAARHVDCDGRTT
IAPEGRAHLVLHRIVAMRNSAIAFADPVRDAATAHEALR

Sequences:

>Translated_279_residues
MPLNADRRSRAHTLLEVLIAMIVGLLVLAAAGALYHAQRVAQRRAEDGFRMRDAAAIALMLIGQQIQMAGFRPLDVEGAS
SLPPVFGCSAGRVRGDGAQVRCEPVRAASDAVLVRYVGDPVSTWPTSSAQVSDCLGQGVGAPGERPLVENRFDAHVSPST
GEPELYCEGSGRPGTPQPVVSGIDQLRVRYLRRDGAQFVDAQAMGADDWRDVVAVHVCVRARGEPMPEAARHVDCDGRTT
IAPEGRAHLVLHRIVAMRNSAIAFADPVRDAATAHEALR
>Mature_278_residues
PLNADRRSRAHTLLEVLIAMIVGLLVLAAAGALYHAQRVAQRRAEDGFRMRDAAAIALMLIGQQIQMAGFRPLDVEGASS
LPPVFGCSAGRVRGDGAQVRCEPVRAASDAVLVRYVGDPVSTWPTSSAQVSDCLGQGVGAPGERPLVENRFDAHVSPSTG
EPELYCEGSGRPGTPQPVVSGIDQLRVRYLRRDGAQFVDAQAMGADDWRDVVAVHVCVRARGEPMPEAARHVDCDGRTTI
APEGRAHLVLHRIVAMRNSAIAFADPVRDAATAHEALR

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29835; Mature: 29704

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLNADRRSRAHTLLEVLIAMIVGLLVLAAAGALYHAQRVAQRRAEDGFRMRDAAAIALM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGQQIQMAGFRPLDVEGASSLPPVFGCSAGRVRGDGAQVRCEPVRAASDAVLVRYVGDP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
VSTWPTSSAQVSDCLGQGVGAPGERPLVENRFDAHVSPSTGEPELYCEGSGRPGTPQPVV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHH
SGIDQLRVRYLRRDGAQFVDAQAMGADDWRDVVAVHVCVRARGEPMPEAARHVDCDGRTT
HHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEE
IAPEGRAHLVLHRIVAMRNSAIAFADPVRDAATAHEALR
ECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCC
>Mature Secondary Structure 
PLNADRRSRAHTLLEVLIAMIVGLLVLAAAGALYHAQRVAQRRAEDGFRMRDAAAIALM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGQQIQMAGFRPLDVEGASSLPPVFGCSAGRVRGDGAQVRCEPVRAASDAVLVRYVGDP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCC
VSTWPTSSAQVSDCLGQGVGAPGERPLVENRFDAHVSPSTGEPELYCEGSGRPGTPQPVV
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHH
SGIDQLRVRYLRRDGAQFVDAQAMGADDWRDVVAVHVCVRARGEPMPEAARHVDCDGRTT
HHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEE
IAPEGRAHLVLHRIVAMRNSAIAFADPVRDAATAHEALR
ECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA