Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350742

Identifier: 115350742

GI number: 115350742

Start: 766655

End: 767203

Strand: Direct

Name: 115350742

Synonym: Bamb_0688

Alternate gene names: NA

Gene position: 766655-767203 (Clockwise)

Preceding gene: 115350741

Following gene: 115350743

Centisome position: 21.56

GC content: 71.58

Gene sequence:

>549_bases
ATGTTGAGCGGCGGAGCGACGCGAGCCCGCGTTCCGTCCGCTACTCGAAGCTGGCGTCGCGACGCGGGCCTTGCGCTGCC
TGCCGTGATCTCGGTCGGTGCGGCGGTCGCCGCGCTGACCGGCACGTGGTTTGAATCCGCACTCACGGAATCGCGCCGCA
CGCGTGCGTTGTCCGACCGGCTGATTGCATTCCACGCGGCCGATGCGGCACTGGCGGCCTGCACCGCGCGATTGCTGCGC
GGCGGGGCGCCGTACCTGGACGAATCCGCATCATCCGCCGAGCCGGATGCATGGCGACGCACGCCTGCGCTGGGTGCCGC
CGAAGCGTTCGCCCCGTTCGCGTCCTGGCCGATGGCCGCGCAGCCGCCGCGTTGCCTGATCGAAGCCTGGCGAGGCGTCG
GTCCGCAACATAGTCGTGCGTACCTCGTCACCGCGCGCGGCGTCGGCGGCCATGCGTCGAGCGTGGTCTGGCTGCAGAGT
CAGGTCGCGCTGCGCGACGGACGCATCGTTGCGCAGCGCTGGCGTCGCGTCGCGGCGGTGCATCGATGA

Upstream 100 bases:

>100_bases
CAAACGGGTTCGTCGGCGACCTTGCGATGCGAATAGCGGCCGGAGGTGCGAGAAGGCGCGCCGTGGCGCCCTGCGACATG
CAGCGCGCGCCGGAGGCACC

Downstream 100 bases:

>100_bases
GACGGCCTGCGCGAATGCGCCGAACAGCGGCGTTCACGTTGCTCGAACTGATGATCGTGCTCGCGATCGTCGCCGTGCTG
GCCGGGTGGGGGATCCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLSGGATRARVPSATRSWRRDAGLALPAVISVGAAVAALTGTWFESALTESRRTRALSDRLIAFHAADAALAACTARLLR
GGAPYLDESASSAEPDAWRRTPALGAAEAFAPFASWPMAAQPPRCLIEAWRGVGPQHSRAYLVTARGVGGHASSVVWLQS
QVALRDGRIVAQRWRRVAAVHR

Sequences:

>Translated_182_residues
MLSGGATRARVPSATRSWRRDAGLALPAVISVGAAVAALTGTWFESALTESRRTRALSDRLIAFHAADAALAACTARLLR
GGAPYLDESASSAEPDAWRRTPALGAAEAFAPFASWPMAAQPPRCLIEAWRGVGPQHSRAYLVTARGVGGHASSVVWLQS
QVALRDGRIVAQRWRRVAAVHR
>Mature_182_residues
MLSGGATRARVPSATRSWRRDAGLALPAVISVGAAVAALTGTWFESALTESRRTRALSDRLIAFHAADAALAACTARLLR
GGAPYLDESASSAEPDAWRRTPALGAAEAFAPFASWPMAAQPPRCLIEAWRGVGPQHSRAYLVTARGVGGHASSVVWLQS
QVALRDGRIVAQRWRRVAAVHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19333; Mature: 19333

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGGATRARVPSATRSWRRDAGLALPAVISVGAAVAALTGTWFESALTESRRTRALSDR
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAFHAADAALAACTARLLRGGAPYLDESASSAEPDAWRRTPALGAAEAFAPFASWPMAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC
QPPRCLIEAWRGVGPQHSRAYLVTARGVGGHASSVVWLQSQVALRDGRIVAQRWRRVAAV
CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHC
HR
CC
>Mature Secondary Structure
MLSGGATRARVPSATRSWRRDAGLALPAVISVGAAVAALTGTWFESALTESRRTRALSDR
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIAFHAADAALAACTARLLRGGAPYLDESASSAEPDAWRRTPALGAAEAFAPFASWPMAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCC
QPPRCLIEAWRGVGPQHSRAYLVTARGVGGHASSVVWLQSQVALRDGRIVAQRWRRVAAV
CCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHC
HR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA