Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is gltI [H]

Identifier: 115350618

GI number: 115350618

Start: 633236

End: 634129

Strand: Direct

Name: gltI [H]

Synonym: Bamb_0564

Alternate gene names: 115350618

Gene position: 633236-634129 (Clockwise)

Preceding gene: 115350617

Following gene: 115350619

Centisome position: 17.8

GC content: 62.19

Gene sequence:

>894_bases
ATGAAATACCACAAGGCAGTCCTGATGGTCGCGGCGCTGTGCGCGTTCGCGAGCGGCGCGCATGCACAGGAGACCGGCAC
GCTGAAGAAGATCAAGGACACGGGCGTGATCGCGCTGGGGCACCGCGAATCGTCGATCCCGTTCTCCTACTATGACCAGA
ACCAGCAGGTCGTCGGCTATTCGCGCGAATTCCAGATGAAGGTCGTGGACGCGGTGAAGAAGAAGCTGAACCTGCCGAAC
CTGCAGGTCAAGAACATCCCGGTCACGTCGCAGAACCGCATCCCGCTCGTGCAGAACGGCACGGTCGACATCGAGTGCGG
CTCGACGACCAACAACACCGAGCGTCAGCAGCAAGCCGCGTTCTCCGACACGATCTTCGTGATCGGCACGCGCCTGATGA
CGAAGAAGGATTCGGGCGTGAAGGACTTCGCCGACCTGAAGGGCAAGACGGTCGTGACCACCGCCGGCACGACGTCCGAG
CGCCTGCTGCGCAAGATGAACAACGACAAGCAGCTCGGCATGAACATCATCAGCGCGAAGGATCACGGCGACTCGTTCAA
CACGCTCGAGTCGGGCCGCGCGGTCGCGTTCATGATGGACGACGCGCTGCTCGCGGGCGAGCGCGCGAAGGCCAAGCAGC
CGGGCGAGTGGGTGATCGTCGGCACGCCGCAGTCGGAAGAGGCTTACGGCTGCATGATGCGCAAGGGCGATACCGACTTC
AAGAAGGTGGTCGACGACGCGATCTCGCAAGTCGAGAAGTCGGGCGAAGCCGCGAAGATCTACGCGAAGTGGTTCGAGAG
CCCGATTCCGCCGAAGGGGCTGAACCTGAACTTCCCGCTGTCCGATTCGATGAAGAAGCTGTACGCGAACCCGAACGACA
AGGCGCTCGACTGA

Upstream 100 bases:

>100_bases
GGCTTCGTACAGGGCGATTCGTAGTGCGGTAAACAACCAGTTCTTTCAAAAATATTACTTTGATACACTGGCGCGGGTTT
TAGCAAAGGAGATGACCAAA

Downstream 100 bases:

>100_bases
CCACACGGACGTTGACGCAGTAATGACGCTACTGAAACGGAAGAGGCCATGCTTCTTCCGTTTCTTTTTGCTGGAGTCTT
GCCTATGTCTTACCACTGGA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQMKVVDAVKKKLNLPN
LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE
RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF
KKVVDDAISQVEKSGEAAKIYAKWFESPIPPKGLNLNFPLSDSMKKLYANPNDKALD

Sequences:

>Translated_297_residues
MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQMKVVDAVKKKLNLPN
LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE
RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF
KKVVDDAISQVEKSGEAAKIYAKWFESPIPPKGLNLNFPLSDSMKKLYANPNDKALD
>Mature_297_residues
MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQMKVVDAVKKKLNLPN
LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE
RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF
KKVVDDAISQVEKSGEAAKIYAKWFESPIPPKGLNLNFPLSDSMKKLYANPNDKALD

Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=70.479704797048, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=25.3787878787879, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787031, Length=268, Percent_Identity=27.2388059701493, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788648, Length=238, Percent_Identity=25.6302521008403, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788649, Length=240, Percent_Identity=24.1666666666667, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 32620; Mature: 32620

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY
CCHHHHHHHHHHHHHHHCCCCCHHCCCHHEECCCCEEEECCCCCCCCEEEECCCCEEEEC
SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAA
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH
FSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK
HHCEEEEEECHHEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEEECC
DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF
CCCCCCCHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCHH
KKVVDDAISQVEKSGEAAKIYAKWFESPIPPKGLNLNFPLSDSMKKLYANPNDKALD
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKYHKAVLMVAALCAFASGAHAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY
CCHHHHHHHHHHHHHHHCCCCCHHCCCHHEECCCCEEEECCCCCCCCEEEECCCCEEEEC
SREFQMKVVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNTERQQQAA
CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH
FSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK
HHCEEEEEECHHEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEEECC
DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDTDF
CCCCCCCHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCHH
KKVVDDAISQVEKSGEAAKIYAKWFESPIPPKGLNLNFPLSDSMKKLYANPNDKALD
HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]