Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350582

Identifier: 115350582

GI number: 115350582

Start: 593567

End: 594625

Strand: Direct

Name: 115350582

Synonym: Bamb_0528

Alternate gene names: NA

Gene position: 593567-594625 (Clockwise)

Preceding gene: 115350581

Following gene: 115350586

Centisome position: 16.69

GC content: 65.72

Gene sequence:

>1059_bases
ATGCCCAAGCTGTCCCGCCGTATTCTGAGCGCGCTTGCCGCGTCGTTGTGCATGTCGTTCGCCCACGCGGCGGACCTGTC
GCACTGGCCGGCGGACAGCGCGAAGGCGCTGAACGCGATGATCGCCGCCCATGCGAATCGCGGCGACTACGCGGTGTTCG
ACGCCGACAACACGACCTACCGCTACGACCTCGAGGAATCGCTGCTGCCGTATCTCGAGAACCGCGGCGTGCTCACGCGC
GACTCGCTCGATCCGTCGCTGAAGCTGATCCCGTTCAAGGATTCCGCCGACTACAAGGAATCGCTGACGAGCTACTACTA
CCGGCTTTGCGAGATCGACGACCTGGTCTGCTACCCGTGGATCGCGCAGGCGTTCGCGGGGCTGTCGCTCGCGGACCTGA
AGCGCCACGTCGACGCGATGCTCGCCGACGGCAAGCCGGTGCCGATTCGCTACTGGCAGGGCGACAAGGTCGTCGACGGC
GCCGCGAATCCGCCGCGCTTCTTCCGCGGGATGCAGGAGCTATACAACGCGCTGCGCGAGAACGGGATCGAGGTCTACGT
GATGACCGCCGCGCACGAGGAACTCGCGCGGCTCGTGCTGTCCGATCCGAAATACGGCTACAACGTGAAGCCGCAGAACG
TGATCGGCGTGACGACACTGCTGCGCAACCCGGCGACGGGCGCGCTGACGACGTCGCGGCTGCAGATCAAGGCCGGCAAG
TACGACGAGGCCGCGAACCGCAGCCTCGTGATCACGCCGTTCCTGATGAACCCGATGACGTGGTACGAAGGCAAGCTCGG
CTCGATCGTCGGCTGGATCGACCAGTGGAAGAAGCCGGTGCTCGTCGCGGGCGACACGCCGACGTCCGACGGCTACATGC
TGCTGAATGCGACCGACGTCGCGCGCGGCGGCGTGCGCGTCTGGGTCAACAAGAAGGACAAGCAGATGGCGCAGATCCGC
GCGTGGTCGGACGAATCGGCCGCGAAGCAGAAAGCGCTCGGCCTGCCGGTGACGGCGGACAAGAACTGGATCGTCGTGAA
GCCCGACGCGATCCAGTAA

Upstream 100 bases:

>100_bases
CTTTCCCACCGCATGCCCGCGCCGCAATCGCGCGATGCTGCCGGGGATCAGGCCCTCGTCATCGATTTGTCACCACACTG
TCACGAAAGGGAGCGACGTC

Downstream 100 bases:

>100_bases
GCGGGGAGGGGCGCAGGCCGCCCCTGCCGGTGCGGCGGCAAATCAGCCTGGGTTCAGCCTTTGATCAGCCTTCGCGCTCG
TCGAGCAGCTTCAGCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPKLSRRILSALAASLCMSFAHAADLSHWPADSAKALNAMIAAHANRGDYAVFDADNTTYRYDLEESLLPYLENRGVLTR
DSLDPSLKLIPFKDSADYKESLTSYYYRLCEIDDLVCYPWIAQAFAGLSLADLKRHVDAMLADGKPVPIRYWQGDKVVDG
AANPPRFFRGMQELYNALRENGIEVYVMTAAHEELARLVLSDPKYGYNVKPQNVIGVTTLLRNPATGALTTSRLQIKAGK
YDEAANRSLVITPFLMNPMTWYEGKLGSIVGWIDQWKKPVLVAGDTPTSDGYMLLNATDVARGGVRVWVNKKDKQMAQIR
AWSDESAAKQKALGLPVTADKNWIVVKPDAIQ

Sequences:

>Translated_352_residues
MPKLSRRILSALAASLCMSFAHAADLSHWPADSAKALNAMIAAHANRGDYAVFDADNTTYRYDLEESLLPYLENRGVLTR
DSLDPSLKLIPFKDSADYKESLTSYYYRLCEIDDLVCYPWIAQAFAGLSLADLKRHVDAMLADGKPVPIRYWQGDKVVDG
AANPPRFFRGMQELYNALRENGIEVYVMTAAHEELARLVLSDPKYGYNVKPQNVIGVTTLLRNPATGALTTSRLQIKAGK
YDEAANRSLVITPFLMNPMTWYEGKLGSIVGWIDQWKKPVLVAGDTPTSDGYMLLNATDVARGGVRVWVNKKDKQMAQIR
AWSDESAAKQKALGLPVTADKNWIVVKPDAIQ
>Mature_351_residues
PKLSRRILSALAASLCMSFAHAADLSHWPADSAKALNAMIAAHANRGDYAVFDADNTTYRYDLEESLLPYLENRGVLTRD
SLDPSLKLIPFKDSADYKESLTSYYYRLCEIDDLVCYPWIAQAFAGLSLADLKRHVDAMLADGKPVPIRYWQGDKVVDGA
ANPPRFFRGMQELYNALRENGIEVYVMTAAHEELARLVLSDPKYGYNVKPQNVIGVTTLLRNPATGALTTSRLQIKAGKY
DEAANRSLVITPFLMNPMTWYEGKLGSIVGWIDQWKKPVLVAGDTPTSDGYMLLNATDVARGGVRVWVNKKDKQMAQIRA
WSDESAAKQKALGLPVTADKNWIVVKPDAIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39150; Mature: 39019

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLSRRILSALAASLCMSFAHAADLSHWPADSAKALNAMIAAHANRGDYAVFDADNTTY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
RYDLEESLLPYLENRGVLTRDSLDPSLKLIPFKDSADYKESLTSYYYRLCEIDDLVCYPW
EEECHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHH
IAQAFAGLSLADLKRHVDAMLADGKPVPIRYWQGDKVVDGAANPPRFFRGMQELYNALRE
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHH
NGIEVYVMTAAHEELARLVLSDPKYGYNVKPQNVIGVTTLLRNPATGALTTSRLQIKAGK
CCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEEEEEEECCC
YDEAANRSLVITPFLMNPMTWYEGKLGSIVGWIDQWKKPVLVAGDTPTSDGYMLLNATDV
CCHHCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECHH
ARGGVRVWVNKKDKQMAQIRAWSDESAAKQKALGLPVTADKNWIVVKPDAIQ
CCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEECCCCEEEECCCCCC
>Mature Secondary Structure 
PKLSRRILSALAASLCMSFAHAADLSHWPADSAKALNAMIAAHANRGDYAVFDADNTTY
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEE
RYDLEESLLPYLENRGVLTRDSLDPSLKLIPFKDSADYKESLTSYYYRLCEIDDLVCYPW
EEECHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHH
IAQAFAGLSLADLKRHVDAMLADGKPVPIRYWQGDKVVDGAANPPRFFRGMQELYNALRE
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHH
NGIEVYVMTAAHEELARLVLSDPKYGYNVKPQNVIGVTTLLRNPATGALTTSRLQIKAGK
CCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHCCCCCCCEEEEEEEEECCC
YDEAANRSLVITPFLMNPMTWYEGKLGSIVGWIDQWKKPVLVAGDTPTSDGYMLLNATDV
CCHHCCCEEEEEEHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECHH
ARGGVRVWVNKKDKQMAQIRAWSDESAAKQKALGLPVTADKNWIVVKPDAIQ
CCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA