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The map label for this gene is yphB [H]

Identifier: 115350580

GI number: 115350580

Start: 591429

End: 592490

Strand: Direct

Name: yphB [H]

Synonym: Bamb_0526

Alternate gene names: 115350580

Gene position: 591429-592490 (Clockwise)

Preceding gene: 115350579

Following gene: 115350581

Centisome position: 16.63

GC content: 72.88

Gene sequence:

>1062_bases
ATGACCGCCACGTCCTCGCGCACCTTGTCGTCCACGAGCCAGTCGCGCCGCGCGCGCCTGGCTGCCGCCGCGCAGCCGGT
CAGCGCCGGCCCGCAGACCGCCGCGTTCGCGCAGGGCGTCGGCGCCGCGCATGCGGCGGCCGTCACGCTGTCGAACGCGG
CGCTGCGGCTCGACGTGCTGCCGCACCTCGGCGGCGGCATCGCGCGCTTCGACTGGCGCGGCGACCACGGCGCGCTGGTG
CCGGTGTTCCGCCGCTGCGAGCATCCGGAAACGGCCACGGACCCGAACGAACTCGCGTGCTATCCGCTGCTGCCGTATTC
GAACCGGATCGGCAACGGCCGCTTCGAATGCGACGGGCGCAGCGTCGCGGTGCCGCGTAATCGTCGCGACGAGCCGCTGC
CGATTCACGGCGACGGCTGGCTCGCGCCGTGGCAGGTGGACGACGCGACCGACACGACGCTGCAGCTGTCGCTCGATCGC
GCGAGCGGTGCGCCGTATGCGTTTCGCGCGATCCAGTCGTTCGCGCTCGACGACACGACGCTGGCGATCGCACTGACGAT
CGAGAATGCGGGACGCGCGCGGCTGCCGTTCGGTCTCGGCGTGCATCCGTTCCTGGTGCGCGACGACGTGACCGAGCTTG
CCGCGGCCGCGGGCGGGCTGTGGCTGTCGGGCGCCGATTTCCTGCCGGTGCGGCACGTGAGCGTGCCGCCGGCCTGGCAG
TTCGGCGTCGCGTATCCGTTGCCGGCGACGCTCGTCAATCACGCGTTCACCGGCTGGGGCGGCCACGCGGCGGTGAGCTG
GCCGCGCCGCGGGCTGTCGCTGACGGTGGCGGCCGACGCCGATGCGTACGTGCTGTATACGCCGCCCGGCGAGGATTTCT
TCTGTTTCGAACCCGTCGATCATCCGATCAACGCGGTGAATTTGCCCGGGGGTGCCGCCGCGCACGGCATGACGCTGCTC
GCGCCGGGCGAGCGGCTCACGCGGCGTTTCGCGTTCACCGTCGAGCGCGCCGATGCACGCGTCGATGCGGCCGCGCGCGA
AGGGCGCCGGCGACGCGGGTAA

Upstream 100 bases:

>100_bases
TCGACGGCGGCTGGGCCTGATTGTAGGTATGGGTGCTGGGGTTCGCTCGGCACCGTGCGACGACCCGTATCGTTTCATCG
ACGAAGGAAAGGAGTTCACC

Downstream 100 bases:

>100_bases
AATACGCGGTCTACCAACGGTTTGCCGCGAGTATCCGCCATGTCTTCCCCGCTTACTTTCATCGAATCGCTGCGCGCCGC
GTGGCAGCGCACGAATTCGC

Product: aldose 1-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTATSSRTLSSTSQSRRARLAAAAQPVSAGPQTAAFAQGVGAAHAAAVTLSNAALRLDVLPHLGGGIARFDWRGDHGALV
PVFRRCEHPETATDPNELACYPLLPYSNRIGNGRFECDGRSVAVPRNRRDEPLPIHGDGWLAPWQVDDATDTTLQLSLDR
ASGAPYAFRAIQSFALDDTTLAIALTIENAGRARLPFGLGVHPFLVRDDVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPATLVNHAFTGWGGHAAVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLL
APGERLTRRFAFTVERADARVDAAAREGRRRRG

Sequences:

>Translated_353_residues
MTATSSRTLSSTSQSRRARLAAAAQPVSAGPQTAAFAQGVGAAHAAAVTLSNAALRLDVLPHLGGGIARFDWRGDHGALV
PVFRRCEHPETATDPNELACYPLLPYSNRIGNGRFECDGRSVAVPRNRRDEPLPIHGDGWLAPWQVDDATDTTLQLSLDR
ASGAPYAFRAIQSFALDDTTLAIALTIENAGRARLPFGLGVHPFLVRDDVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
FGVAYPLPATLVNHAFTGWGGHAAVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLL
APGERLTRRFAFTVERADARVDAAAREGRRRRG
>Mature_352_residues
TATSSRTLSSTSQSRRARLAAAAQPVSAGPQTAAFAQGVGAAHAAAVTLSNAALRLDVLPHLGGGIARFDWRGDHGALVP
VFRRCEHPETATDPNELACYPLLPYSNRIGNGRFECDGRSVAVPRNRRDEPLPIHGDGWLAPWQVDDATDTTLQLSLDRA
SGAPYAFRAIQSFALDDTTLAIALTIENAGRARLPFGLGVHPFLVRDDVTELAAAAGGLWLSGADFLPVRHVSVPPAWQF
GVAYPLPATLVNHAFTGWGGHAAVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVDHPINAVNLPGGAAAHGMTLLA
PGERLTRRFAFTVERADARVDAAAREGRRRRG

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=297, Percent_Identity=32.6599326599327, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI1790311, Length=262, Percent_Identity=25.5725190839695, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 37605; Mature: 37473

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSSRTLSSTSQSRRARLAAAAQPVSAGPQTAAFAQGVGAAHAAAVTLSNAALRLDVL
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEEEEECCCEEEEEEC
PHLGGGIARFDWRGDHGALVPVFRRCEHPETATDPNELACYPLLPYSNRIGNGRFECDGR
CCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
SVAVPRNRRDEPLPIHGDGWLAPWQVDDATDTTLQLSLDRASGAPYAFRAIQSFALDDTT
EEECCCCCCCCCCEECCCCCCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE
LAIALTIENAGRARLPFGLGVHPFLVRDDVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCCEEECCCHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPATLVNHAFTGWGGHAAVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGAAAHGMTLLAPGERLTRRFAFTVERADARVDAAAREGRRRRG
CCCCEEECCCCCHHCCEEEECCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TATSSRTLSSTSQSRRARLAAAAQPVSAGPQTAAFAQGVGAAHAAAVTLSNAALRLDVL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHEEEEECCCEEEEEEC
PHLGGGIARFDWRGDHGALVPVFRRCEHPETATDPNELACYPLLPYSNRIGNGRFECDGR
CCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCC
SVAVPRNRRDEPLPIHGDGWLAPWQVDDATDTTLQLSLDRASGAPYAFRAIQSFALDDTT
EEECCCCCCCCCCEECCCCCCCCEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE
LAIALTIENAGRARLPFGLGVHPFLVRDDVTELAAAAGGLWLSGADFLPVRHVSVPPAWQ
EEEEEEEECCCCEECCCCCCCCCEEECCCHHHHHHHCCCEEECCCCCCEEEECCCCCCCC
FGVAYPLPATLVNHAFTGWGGHAAVSWPRRGLSLTVAADADAYVLYTPPGEDFFCFEPVD
CCCCCCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCEEEECCCC
HPINAVNLPGGAAAHGMTLLAPGERLTRRFAFTVERADARVDAAAREGRRRRG
CCCCEEECCCCCHHCCEEEECCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]