The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350571

Identifier: 115350571

GI number: 115350571

Start: 582589

End: 582987

Strand: Direct

Name: 115350571

Synonym: Bamb_0517

Alternate gene names: NA

Gene position: 582589-582987 (Clockwise)

Preceding gene: 115350570

Following gene: 115350572

Centisome position: 16.38

GC content: 70.68

Gene sequence:

>399_bases
ATGAAGAAACGTTTCATCGTCGTTGCCGCGGCGCTTGCATGCGCCGGCGCTGCAACATTCGCATCCGCGTTCGCGCAGGC
GAGCGACGCCGCCACTCCGGCGCGCGCGCGCCAAGCGCAGCTCGGCGATCCGTACGTGCCGCCGGCCGCGCGCAAGCCGA
CCGCCGGCACGCAGACGACGGGCGCCGCGCTGCACGCGCAGGTGGTGCGCAAGCTCGCGCGGCAGTTCGGCACGGCCGAT
ACGGAGAACACCGGTTCGATCACCGAAGCGCAGGCGCGCGCGGCGGGCCTCGGCTATGTGGCAAACCACTTCCGGCAGAT
CGACGCGAGCGGCAGCGGCCGCGTGTCGTTCTCCGACGTGCAGCGCTACATGCAGGCGCGCAGCACGAACCAGCAATAA

Upstream 100 bases:

>100_bases
CGCGGCCGCGCATTGATGCGATGGGCGGGCCCGGCGACGCGCGCCCGTGGTGGCGCCGTTGGCCGGCCGTCGACGACCTC
ATTCCAGACTGGAGCCTGAC

Downstream 100 bases:

>100_bases
GCAAGGCGCGCATGGATAACGGGGGCGGAACCCGCGACGCGTCGGGTTCCGCCCCCGTGCACGTGGCGCGGCCATTTCGG
CGCCATCGCCGGCTTTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKKRFIVVAAALACAGAATFASAFAQASDAATPARARQAQLGDPYVPPAARKPTAGTQTTGAALHAQVVRKLARQFGTAD
TENTGSITEAQARAAGLGYVANHFRQIDASGSGRVSFSDVQRYMQARSTNQQ

Sequences:

>Translated_132_residues
MKKRFIVVAAALACAGAATFASAFAQASDAATPARARQAQLGDPYVPPAARKPTAGTQTTGAALHAQVVRKLARQFGTAD
TENTGSITEAQARAAGLGYVANHFRQIDASGSGRVSFSDVQRYMQARSTNQQ
>Mature_132_residues
MKKRFIVVAAALACAGAATFASAFAQASDAATPARARQAQLGDPYVPPAARKPTAGTQTTGAALHAQVVRKLARQFGTAD
TENTGSITEAQARAAGLGYVANHFRQIDASGSGRVSFSDVQRYMQARSTNQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13741; Mature: 13741

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFIVVAAALACAGAATFASAFAQASDAATPARARQAQLGDPYVPPAARKPTAGTQTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
GAALHAQVVRKLARQFGTADTENTGSITEAQARAAGLGYVANHFRQIDASGSGRVSFSDV
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
QRYMQARSTNQQ
HHHHHHHCCCCC
>Mature Secondary Structure
MKKRFIVVAAALACAGAATFASAFAQASDAATPARARQAQLGDPYVPPAARKPTAGTQTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCH
GAALHAQVVRKLARQFGTADTENTGSITEAQARAAGLGYVANHFRQIDASGSGRVSFSDV
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
QRYMQARSTNQQ
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA