| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is mtgA
Identifier: 115350569
GI number: 115350569
Start: 579722
End: 580459
Strand: Direct
Name: mtgA
Synonym: Bamb_0515
Alternate gene names: 115350569
Gene position: 579722-580459 (Clockwise)
Preceding gene: 115350568
Following gene: 115350570
Centisome position: 16.3
GC content: 67.62
Gene sequence:
>738_bases GTGGCGGCGGTAAGCGGCATGCGGCGCACGCGCACGGTCAGCCCGACCCGCTGGATCGTCTATGCGGGTTCGGTGTTCGC GGGCGCGTGGCTCGCGACGCAGCTGTTCTATCTCGTGCAGATCGCGCTGTGGTCGTTCATCAATCCCGGTTCGACCGCGT TCATGCGTACCGACGCATGGTGGCTGTCGCGCGACAAGCCGCCCGCGCAGGTCCAGCACCAGTGGGTGCCGTACGACCAG ATCTCGCGCAACCTGAAGCGCGCGCTGATCGCGTCGGAGGATTCGACCTTCGCGACCAACAACGGCTACGACGTCGACGC GATCCTGCAGGCGTGGGAGAAGAACAAGGCGCGCGGCCGGATCGTCGCGGGCGGCTCGACGATCACGCAGCAGCTCGCGC GCAACCTGTTCCTGTCGCGCGAGAAAAGCTACATCCGCAAGGGGCAGGAGCTGATCATCACGTGGATGCTCGAGACGGTG CTCGACAAGGAGCGGATCTTCGAGATCTACCTGAATTCGGTCGAATGGGGCCGCGGCGTGTACGGCGCCGAGGCCGCCGC ACGCTATTACTACCGGATTCCCGCGAGCCGGCTCGGCGCGTGGCAATCGGCGCGCCTCGCGGTGATGCTGCCGAAGCCGC GCTGGTTCGACGCGCACCGCGGCTCGGCCTATCAGGCGCAGCGCGCGGCCGTCATTGCCCGCCGGATGGGCGCGGCCGAG CTTCCGCAATCGCAGTGA
Upstream 100 bases:
>100_bases CCGAATCGTTCTTCATCTGGCGCGGCGTGCGGCCGGACGGCGCACCCGTGCTGGCCGCGCTGCGCCAGGCGCTCGCGGCG GCCTGAGCGGAGCGCGGCAG
Downstream 100 bases:
>100_bases GGCAGTGAGCGGCGCGCTCGCGCCGTTGCATTGTCCATTCCGTCGCCGGCGCGCGATTGGTGCGCTGCAGCGCATGCGTA TCGCCCGGATTTCGGGTCGC
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAAVSGMRRTRTVSPTRWIVYAGSVFAGAWLATQLFYLVQIALWSFINPGSTAFMRTDAWWLSRDKPPAQVQHQWVPYDQ ISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETV LDKERIFEIYLNSVEWGRGVYGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE LPQSQ
Sequences:
>Translated_245_residues MAAVSGMRRTRTVSPTRWIVYAGSVFAGAWLATQLFYLVQIALWSFINPGSTAFMRTDAWWLSRDKPPAQVQHQWVPYDQ ISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETV LDKERIFEIYLNSVEWGRGVYGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE LPQSQ >Mature_244_residues AAVSGMRRTRTVSPTRWIVYAGSVFAGAWLATQLFYLVQIALWSFINPGSTAFMRTDAWWLSRDKPPAQVQHQWVPYDQI SRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVL DKERIFEIYLNSVEWGRGVYGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAEL PQSQ
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=162, Percent_Identity=44.4444444444444, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI87082258, Length=171, Percent_Identity=35.0877192982456, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786343, Length=162, Percent_Identity=34.5679012345679, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 27882; Mature: 27751
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVSGMRRTRTVSPTRWIVYAGSVFAGAWLATQLFYLVQIALWSFINPGSTAFMRTDAW CCCCCCCHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCE WLSRDKPPAQVQHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGR EECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCE IVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGV EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE CCHHHHHHHHEECCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LPQSQ CCCCC >Mature Secondary Structure AAVSGMRRTRTVSPTRWIVYAGSVFAGAWLATQLFYLVQIALWSFINPGSTAFMRTDAW CCCCCCHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCE WLSRDKPPAQVQHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGR EECCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHCCCCCCE IVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGV EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAE CCHHHHHHHHEECCHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC LPQSQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA