Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350549

Identifier: 115350549

GI number: 115350549

Start: 558916

End: 559230

Strand: Direct

Name: 115350549

Synonym: Bamb_0495

Alternate gene names: NA

Gene position: 558916-559230 (Clockwise)

Preceding gene: 115350548

Following gene: 115350550

Centisome position: 15.72

GC content: 73.97

Gene sequence:

>315_bases
ATGCGACAGATTCTTCTCCTGATTCTTCTTCTCTTCGCGGGCTCGTGGCTTGCGCGCAAGCTGCGCCAGGCCCAGGAGCA
AGCGCACGCGCGCACCGGCCGCGGTGACGGCGCCGACGCGCCCGGTCACGGCGGCGCGGGTGCGGCACGCCCGAACGGCG
GCACGCGCTCGCTGCCCGAGCCGATGGTGCGCTGCGCGGAATGCGGCGTGCATGCGCCGAAGGGCGACGCCGTCGCCGCG
GGCGGCGAATACTTCTGCAGCACCGACCATGCGCGGCGCCACGGCGCACGCGCGAGCGGCCACGACGCGCGATGA

Upstream 100 bases:

>100_bases
GTGCTCGTGTCGTTTGCGGCGCTGCTGCTCGCGTATGTCGGCAGCCGGTTCGTTTTCGAGGTGCTGCTGCACCGCTCCGT
GGTTTGAACGCAGGTTTCCG

Downstream 100 bases:

>100_bases
GCGACGCAGCGCCGCTGTCGGTCGACGCACACGGCTGGGTGCGCGAAGCGCGCCATGCGCCGTCGCCGAATTTCGAGGCG
CGGCCCGCGGGCGCGGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRQILLLILLLFAGSWLARKLRQAQEQAHARTGRGDGADAPGHGGAGAARPNGGTRSLPEPMVRCAECGVHAPKGDAVAA
GGEYFCSTDHARRHGARASGHDAR

Sequences:

>Translated_104_residues
MRQILLLILLLFAGSWLARKLRQAQEQAHARTGRGDGADAPGHGGAGAARPNGGTRSLPEPMVRCAECGVHAPKGDAVAA
GGEYFCSTDHARRHGARASGHDAR
>Mature_104_residues
MRQILLLILLLFAGSWLARKLRQAQEQAHARTGRGDGADAPGHGGAGAARPNGGTRSLPEPMVRCAECGVHAPKGDAVAA
GGEYFCSTDHARRHGARASGHDAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10848; Mature: 10848

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQILLLILLLFAGSWLARKLRQAQEQAHARTGRGDGADAPGHGGAGAARPNGGTRSLPE
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
PMVRCAECGVHAPKGDAVAAGGEYFCSTDHARRHGARASGHDAR
HHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRQILLLILLLFAGSWLARKLRQAQEQAHARTGRGDGADAPGHGGAGAARPNGGTRSLPE
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
PMVRCAECGVHAPKGDAVAAGGEYFCSTDHARRHGARASGHDAR
HHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA