| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is proB
Identifier: 115350541
GI number: 115350541
Start: 550744
End: 551862
Strand: Direct
Name: proB
Synonym: Bamb_0487
Alternate gene names: 115350541
Gene position: 550744-551862 (Clockwise)
Preceding gene: 115350540
Following gene: 115350544
Centisome position: 15.49
GC content: 67.74
Gene sequence:
>1119_bases ATGCGTTCGATCATCGCGGATTCGAAGCGATTGGTGGTGAAGGTGGGCTCGAGCCTCGTGACCAACGACGGCAAGGGGCT CGATCATGCTGCAATCGGCCGCTGGGCGGCCCAGATCGCCGCGCTGCGCGCGCAGGGCAAGGAAGTGGTGCTCGTCAGTT CGGGTGCGATTGCCGAAGGGATGCAGCGGCTCGGCTGGAGCAAGCGTCCGCGCGAGATCGACGAGCTGCAGGCTGCCGCC GCGGTCGGCCAGATGGGGCTCGCGCAAGTCTATGAAAGCCGCTTTACCGAGCACGACATCCGCACCGCGCAGATCCTGCT CACGCACGCCGACCTCGCAGATCGCGAACGCTACCTGAATGCACGCTCGACGCTGCTCACGCTGCTGCGGCTCGGCGTCG TGCCGATCATCAACGAGAACGACACGGTCGTCACCGACGAAATCAAGTTCGGCGACAACGACACGCTCGGCGCACTCGTC GCGAACCTGATCGAAGGCGACGCACTGATCATCCTGACCGACCAGTCGGGGCTGTTCACCGCCGATCCGCGCAAGGATCC GAACGCGACGCTCGTCGCGGAAGCCAGCGCGGGCGCGCCGGACCTCGAGGCGATGGCGGGTGGCGCAGGCTCGAGCCTCG GCCGCGGCGGGATGCTGACGAAGATCCTCGCGGCGAAGCGCGCGGCGCACAGCGGCGCGAACACCGTGATTGCGAGCGGC CGCGAAACCGACGTGCTGGTGCGGCTCGCGGCCGGTGAGGCGATCGGCACGCAGCTGATCGCGCGCACCGCGCGGATGGC CGCGCGCAAGCAATGGATGGCCGATCACCTGCAGGTGCGCGGGCACGTCGTGATCGATGCGGGCGCGGTCGAGAAGCTGA CGGCCGGCGGCAAGAGCCTGCTGCCGATCGGCGTGATCGGCGTGCAGGGTGCGTTCGCGCGCGGCGAGGTCATTGCCTGC GTTGGCCCCGACGGGCGTGAAGTGGCGCGCGGCCTCACGAACTACAGCAGCGCGGAAACGAAGCTGATTCATCGCAAGCC GAGCGGCGAGATCGAGACTGTGCTCGGCTACATGCTGGAGCCGGAGCTGATTCACCGCGACAACCTCGTGCTGGTGTAA
Upstream 100 bases:
>100_bases CGACGCCTGAGCGGACCCGAAACGCACCGGGCATCGCGCCCGGTGCCGGAATTCAATCGCGCCCGGCCGGGCAGGCATCA GATACAGGAGACGGCGCACG
Downstream 100 bases:
>100_bases CGGTTCGGCCCGGCGTCGCGAGACAGCCAAAAAGCTAAAAAGCCCGCATTTGCGCGGGCTTTTTCGTTGCGACGAAGCGG AGCAGGACCGGCCAGGCGGC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRSIIADSKRLVVKVGSSLVTNDGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAA AVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALV ANLIEGDALIILTDQSGLFTADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASG RETDVLVRLAAGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDAGAVEKLTAGGKSLLPIGVIGVQGAFARGEVIAC VGPDGREVARGLTNYSSAETKLIHRKPSGEIETVLGYMLEPELIHRDNLVLV
Sequences:
>Translated_372_residues MRSIIADSKRLVVKVGSSLVTNDGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAA AVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALV ANLIEGDALIILTDQSGLFTADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASG RETDVLVRLAAGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDAGAVEKLTAGGKSLLPIGVIGVQGAFARGEVIAC VGPDGREVARGLTNYSSAETKLIHRKPSGEIETVLGYMLEPELIHRDNLVLV >Mature_372_residues MRSIIADSKRLVVKVGSSLVTNDGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAA AVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLNARSTLLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALV ANLIEGDALIILTDQSGLFTADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASG RETDVLVRLAAGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDAGAVEKLTAGGKSLLPIGVIGVQGAFARGEVIAC VGPDGREVARGLTNYSSAETKLIHRKPSGEIETVLGYMLEPELIHRDNLVLV
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI62912457, Length=292, Percent_Identity=37.3287671232877, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI21361368, Length=294, Percent_Identity=37.0748299319728, Blast_Score=145, Evalue=6e-35, Organism=Escherichia coli, GI1786437, Length=366, Percent_Identity=43.1693989071038, Blast_Score=277, Evalue=8e-76, Organism=Caenorhabditis elegans, GI17569969, Length=281, Percent_Identity=34.8754448398576, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17569967, Length=281, Percent_Identity=34.8754448398576, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6320506, Length=420, Percent_Identity=37.1428571428571, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6321822, Length=414, Percent_Identity=32.6086956521739, Blast_Score=192, Evalue=9e-50, Organism=Drosophila melanogaster, GI21357643, Length=350, Percent_Identity=31.7142857142857, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_BURA4 (B1YSU8)
Other databases:
- EMBL: CP001025 - RefSeq: YP_001807225.1 - ProteinModelPortal: B1YSU8 - GeneID: 6176526 - GenomeReviews: CP001025_GR - KEGG: bac:BamMC406_0512 - HOGENOM: HBG507643 - OMA: TFGDNDM - ProtClustDB: PRK05429 - BioCyc: BAMB398577:BAMMC406_0512-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 39216; Mature: 39216
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIIADSKRLVVKVGSSLVTNDGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEG CCCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH MQRLGWSKRPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLN HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHH ARSTLLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALVANLIEGDALIILTDQSGLFT HHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEE ADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASG CCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECC RETDVLVRLAAGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDAGAVEKLTAGGKSL CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCC LPIGVIGVQGAFARGEVIACVGPDGREVARGLTNYSSAETKLIHRKPSGEIETVLGYMLE CEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHCC PELIHRDNLVLV CHHCCCCCEEEC >Mature Secondary Structure MRSIIADSKRLVVKVGSSLVTNDGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEG CCCCCCCCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH MQRLGWSKRPREIDELQAAAAVGQMGLAQVYESRFTEHDIRTAQILLTHADLADRERYLN HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHH ARSTLLTLLRLGVVPIINENDTVVTDEIKFGDNDTLGALVANLIEGDALIILTDQSGLFT HHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEE ADPRKDPNATLVAEASAGAPDLEAMAGGAGSSLGRGGMLTKILAAKRAAHSGANTVIASG CCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECC RETDVLVRLAAGEAIGTQLIARTARMAARKQWMADHLQVRGHVVIDAGAVEKLTAGGKSL CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCC LPIGVIGVQGAFARGEVIACVGPDGREVARGLTNYSSAETKLIHRKPSGEIETVLGYMLE CEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHHHCC PELIHRDNLVLV CHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA