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The map label for this gene is yoaE [H]

Identifier: 115350504

GI number: 115350504

Start: 508119

End: 510194

Strand: Direct

Name: yoaE [H]

Synonym: Bamb_0450

Alternate gene names: 115350504

Gene position: 508119-510194 (Clockwise)

Preceding gene: 115350503

Following gene: 115350505

Centisome position: 14.29

GC content: 64.55

Gene sequence:

>2076_bases
ATGAACGCCGCCACTCAGATAGCTCGGGCCGTATGCCCACACGATTGTCCGGACACCTGCGCAATGCGCGTGACCGTCGA
AAACGGCCGGGCGATCAAGGTCACGGGCGATCCCGACCATCCGCCCACGCAAGGCGTGTTGTGTACGAAAGTCAGCCGAT
ACGCGGACCGCGTTCATCATCCGGACCGTCTTACCGTTCCGCTCAAGCGCGTCGGTGCGAAGGGAGAAGGGCGATTCGCG
CCGATCAGCTGGAGCGAAGCGCTCGACGAGATCGGCCGTCGGCTCGGTGAAATCGCAGCGCGCGCGCCGGAGGCGATCCT
GCCGTACAGCTATGCGGGAACGATGGGGCTCGTGCAGGGTGAAGGCATTGCGCAGCGCTTCTTCCACAAAATCGGCGCGT
CGCGGCTCGAGCGGGCCATTTGCTCCGCGGCCGGCGCGGCCGGGCTGCGCTATACGTACGGCGGAAACGTCGGCATGCAT
CTCGAGCATTTCGAGGAAAGCGAGCTGATCCTGATCTGGGGCGCCAATCCCATCGCATCGAGCCTGCATTTCTGGACCCG
CGCGCAGGAAGCCAAGCGTCGCGGTGCCCGTCTCGTTGCGATCGATCCGTACCGCTCGCTGACGGCGGAGAAATGTCACC
AGCACATCGCCTTGAAACCCGGCACCGATGGTGCGTTCGCGCTCGGGATGATGCATGTGCTGATTACCGAAGATCTGCTC
GATCACGACTACATCGCGCGTCATACGCTCGGCTTCGAGGCACTCAAGGCGCGAGCCCTGTCCTATCCGCCGGAACGTGT
CGCCCGGATCTGCGGCATCGAAGCGTCGGAGCTGATCGAACTCGCACGTCGTTACGGCGCGACTCGCAAGGCAGCGATCC
GGCTCAATTACGGGATGCAGCGCGTCCGCGGCGGCGGCAATGCCGTGCGCGCGGTCGCGAGCCTGCCTGCGCTGACGGGC
GCGTGGCGCGACCGGGCAGGGGGCCTGCTGCTGTCGTCGTCGGAATCGGCGCCGGTCAATCACGCGGCGCTGCTACGCCC
CGATCTCATGCCCGGCTGGCCGCACAAGCTGCCGCGCAGCATCAACATGAACACGATCGGCGATGCGTTACTGAATCCTG
GCGACGCGGCTTTCGGGCCGAAGGTCGAAGCGGTGATTGTCTACAATTCGAATCCGGTCGCCGTCGCGCCCGACTCGTCG
AGAGTAGCGGCGGGCTTCGCGCGCGAAGATCTGTTCACCGTCGTTCTCGAGCACTTCAAGACCGATACGGTCGATTTCGC
CGACATTGTGTTGCCGGCCACGACCCAGCTCGAGCATCTCGACGTCCACAAGTCGTACGGCCACACCTATGTGATGGCAA
ATTTGCCGGCGATTCCGCCGGTCGGCGACGCACGGCCAAACACCGAAATCTTTCGTGGCATTGCCCGCAGCATGGGGCTC
GACGAGCCCGCGCTGTTTCACAGCGATGAAGAGGTCGCGCAGGCCGCCCTCCGTTGGGACGACCCGGCGCTCGACAGCAA
TTGGGATACGTTGAAGCGTGCCGGCTGGCTGAAGCTCAAGGTGGCGGACGCGCCTTTCGCGAACGGTGGCTTCCGTACGC
CGTCCGGCAAATGCGAGTTCCATAGCGCGCGACTCGAACAGATGGGCATGGACCCGGTGCCCGATTACCTGCCGCCGTTC
GAATCGGCGGAGGCCGCGCCTGAACTCGCCGCCCGCTATCCGCTCGCGATGATTTCGCCGCCGGCGCGGCACTTCCTGAA
CAGCACGTTCGTCAACGTGGACAGCCTGCGCAGCACGGAAGGCCAGCCGCACCTCGACTTGCATCCGGCCGACGCCGATG
CGCGCGGCATCCAGGAGGGCGATGTCGTACGCATCTTCAACGATCGCGGCTCGATGCAGGCAGTTGCGAGAGTGACCGAC
CGCGCGCGACCAGGGCTCGTCGTCGGGCTGTCGATCTGGTGGAAGAAGCTATCGACGGATGGGCGCAACGCGAATGAAGT
GACAAGCCAGGCGCTGACCGATCTCGGTAACTCGGCGACGTTCTACGATTGTCTGGTCGAAGTTGAGCGGATTTGA

Upstream 100 bases:

>100_bases
TTTTCTCCAAAATAGACGGGAAATTCATACGAATTGACGTCTTCTTCGGCCCGTCCACGTAAAATTTGCGAATCCCCTCC
ACGCAGTCGCATCCGAAACG

Downstream 100 bases:

>100_bases
CCGAACTTCGAGATATGATCAGACGAAATCGCTCGAAAGTTGGAAGTGAGCATCTAACCCTGTTGTCGCGGGACCTGCGA
GCCGTTACGATGCGTTTTAG

Product: molybdopterin oxidoreductase

Products: Reduced form of N-Oxide compounds [C]

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MNAATQIARAVCPHDCPDTCAMRVTVENGRAIKVTGDPDHPPTQGVLCTKVSRYADRVHHPDRLTVPLKRVGAKGEGRFA
PISWSEALDEIGRRLGEIAARAPEAILPYSYAGTMGLVQGEGIAQRFFHKIGASRLERAICSAAGAAGLRYTYGGNVGMH
LEHFEESELILIWGANPIASSLHFWTRAQEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLL
DHDYIARHTLGFEALKARALSYPPERVARICGIEASELIELARRYGATRKAAIRLNYGMQRVRGGGNAVRAVASLPALTG
AWRDRAGGLLLSSSESAPVNHAALLRPDLMPGWPHKLPRSINMNTIGDALLNPGDAAFGPKVEAVIVYNSNPVAVAPDSS
RVAAGFAREDLFTVVLEHFKTDTVDFADIVLPATTQLEHLDVHKSYGHTYVMANLPAIPPVGDARPNTEIFRGIARSMGL
DEPALFHSDEEVAQAALRWDDPALDSNWDTLKRAGWLKLKVADAPFANGGFRTPSGKCEFHSARLEQMGMDPVPDYLPPF
ESAEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRSTEGQPHLDLHPADADARGIQEGDVVRIFNDRGSMQAVARVTD
RARPGLVVGLSIWWKKLSTDGRNANEVTSQALTDLGNSATFYDCLVEVERI

Sequences:

>Translated_691_residues
MNAATQIARAVCPHDCPDTCAMRVTVENGRAIKVTGDPDHPPTQGVLCTKVSRYADRVHHPDRLTVPLKRVGAKGEGRFA
PISWSEALDEIGRRLGEIAARAPEAILPYSYAGTMGLVQGEGIAQRFFHKIGASRLERAICSAAGAAGLRYTYGGNVGMH
LEHFEESELILIWGANPIASSLHFWTRAQEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLL
DHDYIARHTLGFEALKARALSYPPERVARICGIEASELIELARRYGATRKAAIRLNYGMQRVRGGGNAVRAVASLPALTG
AWRDRAGGLLLSSSESAPVNHAALLRPDLMPGWPHKLPRSINMNTIGDALLNPGDAAFGPKVEAVIVYNSNPVAVAPDSS
RVAAGFAREDLFTVVLEHFKTDTVDFADIVLPATTQLEHLDVHKSYGHTYVMANLPAIPPVGDARPNTEIFRGIARSMGL
DEPALFHSDEEVAQAALRWDDPALDSNWDTLKRAGWLKLKVADAPFANGGFRTPSGKCEFHSARLEQMGMDPVPDYLPPF
ESAEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRSTEGQPHLDLHPADADARGIQEGDVVRIFNDRGSMQAVARVTD
RARPGLVVGLSIWWKKLSTDGRNANEVTSQALTDLGNSATFYDCLVEVERI
>Mature_691_residues
MNAATQIARAVCPHDCPDTCAMRVTVENGRAIKVTGDPDHPPTQGVLCTKVSRYADRVHHPDRLTVPLKRVGAKGEGRFA
PISWSEALDEIGRRLGEIAARAPEAILPYSYAGTMGLVQGEGIAQRFFHKIGASRLERAICSAAGAAGLRYTYGGNVGMH
LEHFEESELILIWGANPIASSLHFWTRAQEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLL
DHDYIARHTLGFEALKARALSYPPERVARICGIEASELIELARRYGATRKAAIRLNYGMQRVRGGGNAVRAVASLPALTG
AWRDRAGGLLLSSSESAPVNHAALLRPDLMPGWPHKLPRSINMNTIGDALLNPGDAAFGPKVEAVIVYNSNPVAVAPDSS
RVAAGFAREDLFTVVLEHFKTDTVDFADIVLPATTQLEHLDVHKSYGHTYVMANLPAIPPVGDARPNTEIFRGIARSMGL
DEPALFHSDEEVAQAALRWDDPALDSNWDTLKRAGWLKLKVADAPFANGGFRTPSGKCEFHSARLEQMGMDPVPDYLPPF
ESAEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRSTEGQPHLDLHPADADARGIQEGDVVRIFNDRGSMQAVARVTD
RARPGLVVGLSIWWKKLSTDGRNANEVTSQALTDLGNSATFYDCLVEVERI

Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds. Allows E.Coli To Grow Anaerobically On Me(2)So As Respiratory Oxidant. [C]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasm Face Of The Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI87081797, Length=765, Percent_Identity=27.843137254902, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI1787870, Length=789, Percent_Identity=27.6299112801014, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI171474008, Length=757, Percent_Identity=26.9484808454425, Blast_Score=219, Evalue=5e-58,
Organism=Escherichia coli, GI3868721, Length=727, Percent_Identity=25.7221458046768, Blast_Score=189, Evalue=4e-49,
Organism=Escherichia coli, GI1787231, Length=735, Percent_Identity=25.4421768707483, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI87081994, Length=752, Percent_Identity=24.8670212765957, Blast_Score=153, Evalue=4e-38,
Organism=Escherichia coli, GI145693196, Length=718, Percent_Identity=25.3481894150418, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1788534, Length=348, Percent_Identity=22.1264367816092, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI3868720, Length=280, Percent_Identity=26.4285714285714, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787778, Length=289, Percent_Identity=26.2975778546713, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 75174; Mature: 75174

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAATQIARAVCPHDCPDTCAMRVTVENGRAIKVTGDPDHPPTQGVLCTKVSRYADRVHH
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
PDRLTVPLKRVGAKGEGRFAPISWSEALDEIGRRLGEIAARAPEAILPYSYAGTMGLVQG
CCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEC
EGIAQRFFHKIGASRLERAICSAAGAAGLRYTYGGNVGMHLEHFEESELILIWGANPIAS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHH
SLHFWTRAQEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLL
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH
DHDYIARHTLGFEALKARALSYPPERVARICGIEASELIELARRYGATRKAAIRLNYGMQ
CCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH
RVRGGGNAVRAVASLPALTGAWRDRAGGLLLSSSESAPVNHAALLRPDLMPGWPHKLPRS
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEECCCCCCCCCCCCCCC
INMNTIGDALLNPGDAAFGPKVEAVIVYNSNPVAVAPDSSRVAAGFAREDLFTVVLEHFK
CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC
TDTVDFADIVLPATTQLEHLDVHKSYGHTYVMANLPAIPPVGDARPNTEIFRGIARSMGL
CCCCCHHHEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
DEPALFHSDEEVAQAALRWDDPALDSNWDTLKRAGWLKLKVADAPFANGGFRTPSGKCEF
CCCHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCH
HSARLEQMGMDPVPDYLPPFESAEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRSTE
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHEEHHHHHCCC
GQPHLDLHPADADARGIQEGDVVRIFNDRGSMQAVARVTDRARPGLVVGLSIWWKKLSTD
CCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCC
GRNANEVTSQALTDLGNSATFYDCLVEVERI
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNAATQIARAVCPHDCPDTCAMRVTVENGRAIKVTGDPDHPPTQGVLCTKVSRYADRVHH
CCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
PDRLTVPLKRVGAKGEGRFAPISWSEALDEIGRRLGEIAARAPEAILPYSYAGTMGLVQG
CCCEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEC
EGIAQRFFHKIGASRLERAICSAAGAAGLRYTYGGNVGMHLEHFEESELILIWGANPIAS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHH
SLHFWTRAQEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLL
HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHH
DHDYIARHTLGFEALKARALSYPPERVARICGIEASELIELARRYGATRKAAIRLNYGMQ
CCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHH
RVRGGGNAVRAVASLPALTGAWRDRAGGLLLSSSESAPVNHAALLRPDLMPGWPHKLPRS
HHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHEECCCCCCCCCCCCCCC
INMNTIGDALLNPGDAAFGPKVEAVIVYNSNPVAVAPDSSRVAAGFAREDLFTVVLEHFK
CCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHC
TDTVDFADIVLPATTQLEHLDVHKSYGHTYVMANLPAIPPVGDARPNTEIFRGIARSMGL
CCCCCHHHEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
DEPALFHSDEEVAQAALRWDDPALDSNWDTLKRAGWLKLKVADAPFANGGFRTPSGKCEF
CCCHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCH
HSARLEQMGMDPVPDYLPPFESAEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRSTE
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHEEHHHHHCCC
GQPHLDLHPADADARGIQEGDVVRIFNDRGSMQAVARVTDRARPGLVVGLSIWWKKLSTD
CCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHCCC
GRNANEVTSQALTDLGNSATFYDCLVEVERI
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: Fe; Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-Oxide; Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

Specific reaction: Reduces Various N-Oxide And Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]