Click here to switch to the map view.

The map label for this gene is 115350482

Identifier: 115350482

GI number: 115350482

Start: 478791

End: 479867

Strand: Direct

Name: 115350482

Synonym: Bamb_0428

Alternate gene names: NA

Gene position: 478791-479867 (Clockwise)

Preceding gene: 115350481

Following gene: 115350484

Centisome position: 13.46

GC content: 55.99

Gene sequence:

>1077_bases
ATGGATGATTCAAGTGAAATGAAATCGCGCTTCAAGGCCGTCAGAAACGAGGCGAAGGAGACGCGTGCGTCGCTTTACCA
TCTCACGAATCAATGCAACCTTCGTTGCAAAGGGTGCTGGTTTTTCGAGAACGAATTCGATACGGCATCACACGAGTTGA
ACGATGCGCTTCGCTTTGAGCAGCGTGTGAGGGAGGAGGCTGCGCGCGGGATCAATGCGCCGCTGTTGATCGGCGGCGAG
CCCGCATTGCATCTCGATCGGATACGGATGTTCCGGAAACACATGCCGAAGGTATCCGTATCGACGAACGGGCTTCGAAG
AATCCCGTATGAAGGTTTCGAGGACATCACCATCGCGATTTCCGTATTTGGCGGTGGGCCACTCGACGACGAATTGCGTG
CGATCGGCCCGAACGGAAAGCGCTTCACCGGCTTGTTCGGCAAGGCATTGGCAAACTATCGCGACGACGAGCGTGCGGGT
TTTGTCTACGCAGTGACGATTGACGGTATTGCGTACATCGAGGAAACGGTGCGCAAGATTCGAGATAATGGGAATCGGTT
GCTGTTCAATTACTACAGCCCCTACGACATTGAAGGTCCGCTGCGGCGGCGGGGGGAGGAGCAGTTGCTGGACGTGCTGC
TCGACTTGAAGGCGAAATACCCTGAAACCATTGCAAGCCATCCCTATTATCTGGCTGCCCTGATGCGGGGCGAGACCGCT
TGGGGAGTATTCAATGCTGCGAGTTGTCCGAGCGTCAGTGAGGATCATCCGCAAAACGTGGATCGTTTCGCATCAGGGTG
GCCCGCACTACCGAGCTTCAATGCGTATCGCGCCGATTTTGCCTCGCTTGCGCGCTGTTGTACGTCAGGAGAATGCGCGA
AGTGTCGCGACAGTCAGGCCGTGATTTCCTGGTTGCTGGTCAACGCCAGACATGTACTGAAGGAAGACGACGGGCTCCGG
ACATGGACGGAGGTGGCGGAAAGCTATTTCAGTCAGTTTGTCTGGTCGAAATACCATCCGCGCAACCGTATCGAGCACGC
GTCGGTTCGCGCAATCCAATGCGACAGCGTCGAGTAG

Upstream 100 bases:

>100_bases
CATGTTCCGGCGCGAGCATTCGTCGCTGTGGCCGGAACTCACCAGGGGATTGCTGCGCTGACAGCACGTGTCGCTTTCAC
CCTCTCATCAGGAGACCACG

Downstream 100 bases:

>100_bases
TCAGCATGCCGCTGGCATAGCCGGATCGAAACCCGACGAGCCTGTTACGACGCGGCCGGTGTGCCGAAAAGAAAAAAGCC
CGCATGAGCGGGCTTTTCTC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MDDSSEMKSRFKAVRNEAKETRASLYHLTNQCNLRCKGCWFFENEFDTASHELNDALRFEQRVREEAARGINAPLLIGGE
PALHLDRIRMFRKHMPKVSVSTNGLRRIPYEGFEDITIAISVFGGGPLDDELRAIGPNGKRFTGLFGKALANYRDDERAG
FVYAVTIDGIAYIEETVRKIRDNGNRLLFNYYSPYDIEGPLRRRGEEQLLDVLLDLKAKYPETIASHPYYLAALMRGETA
WGVFNAASCPSVSEDHPQNVDRFASGWPALPSFNAYRADFASLARCCTSGECAKCRDSQAVISWLLVNARHVLKEDDGLR
TWTEVAESYFSQFVWSKYHPRNRIEHASVRAIQCDSVE

Sequences:

>Translated_358_residues
MDDSSEMKSRFKAVRNEAKETRASLYHLTNQCNLRCKGCWFFENEFDTASHELNDALRFEQRVREEAARGINAPLLIGGE
PALHLDRIRMFRKHMPKVSVSTNGLRRIPYEGFEDITIAISVFGGGPLDDELRAIGPNGKRFTGLFGKALANYRDDERAG
FVYAVTIDGIAYIEETVRKIRDNGNRLLFNYYSPYDIEGPLRRRGEEQLLDVLLDLKAKYPETIASHPYYLAALMRGETA
WGVFNAASCPSVSEDHPQNVDRFASGWPALPSFNAYRADFASLARCCTSGECAKCRDSQAVISWLLVNARHVLKEDDGLR
TWTEVAESYFSQFVWSKYHPRNRIEHASVRAIQCDSVE
>Mature_358_residues
MDDSSEMKSRFKAVRNEAKETRASLYHLTNQCNLRCKGCWFFENEFDTASHELNDALRFEQRVREEAARGINAPLLIGGE
PALHLDRIRMFRKHMPKVSVSTNGLRRIPYEGFEDITIAISVFGGGPLDDELRAIGPNGKRFTGLFGKALANYRDDERAG
FVYAVTIDGIAYIEETVRKIRDNGNRLLFNYYSPYDIEGPLRRRGEEQLLDVLLDLKAKYPETIASHPYYLAALMRGETA
WGVFNAASCPSVSEDHPQNVDRFASGWPALPSFNAYRADFASLARCCTSGECAKCRDSQAVISWLLVNARHVLKEDDGLR
TWTEVAESYFSQFVWSKYHPRNRIEHASVRAIQCDSVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40683; Mature: 40683

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSSEMKSRFKAVRNEAKETRASLYHLTNQCNLRCKGCWFFENEFDTASHELNDALRFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
QRVREEAARGINAPLLIGGEPALHLDRIRMFRKHMPKVSVSTNGLRRIPYEGFEDITIAI
HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEE
SVFGGGPLDDELRAIGPNGKRFTGLFGKALANYRDDERAGFVYAVTIDGIAYIEETVRKI
EECCCCCCCCHHHEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHH
RDNGNRLLFNYYSPYDIEGPLRRRGEEQLLDVLLDLKAKYPETIASHPYYLAALMRGETA
HCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
WGVFNAASCPSVSEDHPQNVDRFASGWPALPSFNAYRADFASLARCCTSGECAKCRDSQA
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCHHH
VISWLLVNARHVLKEDDGLRTWTEVAESYFSQFVWSKYHPRNRIEHASVRAIQCDSVE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MDDSSEMKSRFKAVRNEAKETRASLYHLTNQCNLRCKGCWFFENEFDTASHELNDALRFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHH
QRVREEAARGINAPLLIGGEPALHLDRIRMFRKHMPKVSVSTNGLRRIPYEGFEDITIAI
HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEE
SVFGGGPLDDELRAIGPNGKRFTGLFGKALANYRDDERAGFVYAVTIDGIAYIEETVRKI
EECCCCCCCCHHHEECCCCCEEHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHH
RDNGNRLLFNYYSPYDIEGPLRRRGEEQLLDVLLDLKAKYPETIASHPYYLAALMRGETA
HCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
WGVFNAASCPSVSEDHPQNVDRFASGWPALPSFNAYRADFASLARCCTSGECAKCRDSQA
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCHHH
VISWLLVNARHVLKEDDGLRTWTEVAESYFSQFVWSKYHPRNRIEHASVRAIQCDSVE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA