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The map label for this gene is yecD [C]

Identifier: 115350473

GI number: 115350473

Start: 469285

End: 469836

Strand: Direct

Name: yecD [C]

Synonym: Bamb_0419

Alternate gene names: 115350473

Gene position: 469285-469836 (Clockwise)

Preceding gene: 115350472

Following gene: 115350474

Centisome position: 13.19

GC content: 68.12

Gene sequence:

>552_bases
ATGGCAGACACCGCAGTGATCGTGATCGACATGCAGCGCGGGCTGGTGCAGCGGGCGCGGCCCGCGTACCGGCTCGACGA
CGTCGTAACGGGCATCAACCGGCTGACGGCAGCGGCGCGCGCGGCCAACGCGCCCGTGTGCTTCGTGCAGCACGACGGCG
ATGCGGACGACGACATCGTGCCCGGCACGCCCGGCTGGGAACTGCATGAGGACTTGATCGTCGGAGGCGCCGACTGGCGC
ATCCGCAAGCAGGTGAGCGATTCGTTCCACGACACGCCGCTCGCCGCGCAGCTCGACAGCCACGGTGTCCGTTCGGTGCT
GATCTGCGGCTATGCGACCGAGTTCTGCGTCGATTCGGCCGCCCGCCGCGCGGCACTGCTCGGCTACCGGACGACCGTCG
TCTCCGATCTGCACACGACGAACGAGCGCACGCACCTGTCGGCCGCGCAGATCGTCGCGCATCATCACTTCGTGTGGGAA
AACAATACGCTGTCGGGTAACGCGGTGCGGCCGCGTCCGCTCGCGGACGTGCTTGCAACGGAGTTCGCATGA

Upstream 100 bases:

>100_bases
GGCGACGCGAAGGCGTGGCTCGACGCGCGCACGCAGCCGATCTGACGCAATACGCGATACCGGCCGCACGACGGCCGGAC
CTTGACCGAGAGGGCAACCG

Downstream 100 bases:

>100_bases
CGATCAAGGCCGTGGTGTTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCGGAATATCTGTACCGGCAACTGATTCCG
GACGAAACCGAGCGTCGCTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase; Amidase; Acetyltransferase GNAT Family; Isochorismatase/Nicotamidase Family Hydrolase; 2 3-Dihydro-2 3-Dihydroxybenzoate Synthetase; Isochorismatase Hydrolase Protein; Acetyltransferase; Isochorismatase Protein; Hydrolase; Hydrolase Isochorismatase Family; Isochorismatase-Like Protein; Streptothricin Hydrolase; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MADTAVIVIDMQRGLVQRARPAYRLDDVVTGINRLTAAARAANAPVCFVQHDGDADDDIVPGTPGWELHEDLIVGGADWR
IRKQVSDSFHDTPLAAQLDSHGVRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERTHLSAAQIVAHHHFVWE
NNTLSGNAVRPRPLADVLATEFA

Sequences:

>Translated_183_residues
MADTAVIVIDMQRGLVQRARPAYRLDDVVTGINRLTAAARAANAPVCFVQHDGDADDDIVPGTPGWELHEDLIVGGADWR
IRKQVSDSFHDTPLAAQLDSHGVRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERTHLSAAQIVAHHHFVWE
NNTLSGNAVRPRPLADVLATEFA
>Mature_182_residues
ADTAVIVIDMQRGLVQRARPAYRLDDVVTGINRLTAAARAANAPVCFVQHDGDADDDIVPGTPGWELHEDLIVGGADWRI
RKQVSDSFHDTPLAAQLDSHGVRSVLICGYATEFCVDSAARRAALLGYRTTVVSDLHTTNERTHLSAAQIVAHHHFVWEN
NTLSGNAVRPRPLADVLATEFA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081992, Length=147, Percent_Identity=29.2517006802721, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19917; Mature: 19785

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTAVIVIDMQRGLVQRARPAYRLDDVVTGINRLTAAARAANAPVCFVQHDGDADDDIV
CCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGTPGWELHEDLIVGGADWRIRKQVSDSFHDTPLAAQLDSHGVRSVLICGYATEFCVDSA
CCCCCCCCCHHEEECCCCCEEHHHHHHCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHH
ARRAALLGYRTTVVSDLHTTNERTHLSAAQIVAHHHFVWENNTLSGNAVRPRPLADVLAT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHH
EFA
CCC
>Mature Secondary Structure 
ADTAVIVIDMQRGLVQRARPAYRLDDVVTGINRLTAAARAANAPVCFVQHDGDADDDIV
CCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PGTPGWELHEDLIVGGADWRIRKQVSDSFHDTPLAAQLDSHGVRSVLICGYATEFCVDSA
CCCCCCCCCHHEEECCCCCEEHHHHHHCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHH
ARRAALLGYRTTVVSDLHTTNERTHLSAAQIVAHHHFVWENNTLSGNAVRPRPLADVLAT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHH
EFA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA