Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is yegP [H]

Identifier: 115350454

GI number: 115350454

Start: 450691

End: 451023

Strand: Direct

Name: yegP [H]

Synonym: Bamb_0400

Alternate gene names: 115350454

Gene position: 450691-451023 (Clockwise)

Preceding gene: 115350453

Following gene: 115350455

Centisome position: 12.67

GC content: 58.56

Gene sequence:

>333_bases
ATGGCTGCAAAGTTCGAGATCAAAAAGGCGACGAACGGTCAGTACTTCTTCCATTTGAAGTCGGCGAATGGCGAGATCAT
CCTCGCGAGCGAGCGGTACGAGGAGAAGCGCGGCGCGCAAACCGGCATCGCTTCCGTCCGCGAGAATGCGCCGCTGGACG
AACGTTATGAGCGGAAGGTCGCGCACAACGGCGAGTACATGTTCAACCTGAAGGCCGCAAACCGCCAGGTTATCGGTACG
AGTGAAACGTACAAGAGCACGCAAGGCCGCGACAACGGTATTGCTGCCGTCAAGCGCGACGCGCCTGTCGCAGAGACTTT
CGATCTCGCCTGA

Upstream 100 bases:

>100_bases
GTCTTCAACAGTCTGCTTGGCGGAAGTTGGATTGTGGTGGTTGCGGCTCCTACACTGGTCAATGTCCGAGGGTCGGACGT
TCTTTTAGGAGAGTAACCAC

Downstream 100 bases:

>100_bases
TAGACGATCGTGCCGCGGCAAACGCCTTCGGGCGGGCGCCGCGGCCCCCGTTTTTGCGAGGCCGGACAAAGCGCGGTATG
GTGTCGTCCGCGCGGTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAAKFEIKKATNGQYFFHLKSANGEIILASERYEEKRGAQTGIASVRENAPLDERYERKVAHNGEYMFNLKAANRQVIGT
SETYKSTQGRDNGIAAVKRDAPVAETFDLA

Sequences:

>Translated_110_residues
MAAKFEIKKATNGQYFFHLKSANGEIILASERYEEKRGAQTGIASVRENAPLDERYERKVAHNGEYMFNLKAANRQVIGT
SETYKSTQGRDNGIAAVKRDAPVAETFDLA
>Mature_109_residues
AAKFEIKKATNGQYFFHLKSANGEIILASERYEEKRGAQTGIASVRENAPLDERYERKVAHNGEYMFNLKAANRQVIGTS
ETYKSTQGRDNGIAAVKRDAPVAETFDLA

Specific function: Unknown

COG id: COG3422

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0339 family. Duplicated subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082037, Length=98, Percent_Identity=55.1020408163265, Blast_Score=115, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010879 [H]

Pfam domain/function: PF07411 DUF1508 [H]

EC number: NA

Molecular weight: Translated: 12272; Mature: 12141

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKFEIKKATNGQYFFHLKSANGEIILASERYEEKRGAQTGIASVRENAPLDERYERKV
CCCCEEEEECCCCEEEEEEECCCCCEEEECCCHHHHCCCHHCHHHHHCCCCCCHHHHHHH
AHNGEYMFNLKAANRQVIGTSETYKSTQGRDNGIAAVKRDAPVAETFDLA
HCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEECCC
>Mature Secondary Structure 
AAKFEIKKATNGQYFFHLKSANGEIILASERYEEKRGAQTGIASVRENAPLDERYERKV
CCCEEEEECCCCEEEEEEECCCCCEEEECCCHHHHCCCHHCHHHHHCCCCCCHHHHHHH
AHNGEYMFNLKAANRQVIGTSETYKSTQGRDNGIAAVKRDAPVAETFDLA
HCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]