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The map label for this gene is 115350435

Identifier: 115350435

GI number: 115350435

Start: 425833

End: 426348

Strand: Direct

Name: 115350435

Synonym: Bamb_0381

Alternate gene names: NA

Gene position: 425833-426348 (Clockwise)

Preceding gene: 115350434

Following gene: 115350436

Centisome position: 11.97

GC content: 62.02

Gene sequence:

>516_bases
ATGGCCAAGAAAGAAAGCATTCAGAAAAGCTTGCAGAAAATTCGGCCGCCGCGCGTCCAATTGACCTACGAGGTCGAGAA
GGGCGATGCGATCGAGGTGAAGGAACTGCCGTTCGTCGTCGGGGTCGTCGGCGATCTGGCGGGCCAGTCGGAAATCGAGC
AGCCGAAGCTGCGCGACCGCAAGTTCGTCAATATCGACCGCGACAACTTCGACGACGTGATGAAGGCGATCGAGCCGCGC
GCCGCGTTTCAGGTGGAAAACCGCCTGAGCCCGGAAGGCGGCAAGTTCGCGGTCGACCTGAAGTTCCGTTCGCTGTCGGA
TTTCAGCCCGGACGAAGTCGTCGAACAGGTCGAGCCGCTGCGCCGCCTGCTCGACGCGCGTTCGAAGCTCGCCGACCTGC
GCAACAAGCTCGCCGGCAACGACAAGCTCGAGGATCTGCTGTCGGAAGTGCTGAAGAACACGCAGCAGCTGCAGGAGCTC
GCGAAGGGCACGGGCGGCGACAAAGACGGCGAATGA

Upstream 100 bases:

>100_bases
AGGCCGCCGCCGGGCAGAAGGGCGGGGCCGATCCATTCAGCGCGCTGCGCAACTGACCGCAACTGACGCGATAACCACAA
CTAACCTGGGAGCCGTCGAG

Downstream 100 bases:

>100_bases
CGACGGAGTATTGAGATGAACCAGCAAACGGCTGCGGCCCAAGCGAGCGGCGCGGAATACGCCGCCGGGACTTCGTTGCT
CGACGATATCGTCGAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; T6ss S; Protein ImpB; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDRKFVNIDRDNFDDVMKAIEPR
AAFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPLRRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQEL
AKGTGGDKDGE

Sequences:

>Translated_171_residues
MAKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDRKFVNIDRDNFDDVMKAIEPR
AAFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPLRRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQEL
AKGTGGDKDGE
>Mature_170_residues
AKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDRKFVNIDRDNFDDVMKAIEPRA
AFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPLRRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQELA
KGTGGDKDGE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19232; Mature: 19101

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDR
CCCHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
KFVNIDRDNFDDVMKAIEPRAAFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPL
CEECCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
RRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQELAKGTGGDKDGE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKKESIQKSLQKIRPPRVQLTYEVEKGDAIEVKELPFVVGVVGDLAGQSEIEQPKLRDR
CCHHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
KFVNIDRDNFDDVMKAIEPRAAFQVENRLSPEGGKFAVDLKFRSLSDFSPDEVVEQVEPL
CEECCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
RRLLDARSKLADLRNKLAGNDKLEDLLSEVLKNTQQLQELAKGTGGDKDGE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA