| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is mlaE [H]
Identifier: 115350388
GI number: 115350388
Start: 379527
End: 380294
Strand: Direct
Name: mlaE [H]
Synonym: Bamb_0333
Alternate gene names: 115350388
Gene position: 379527-380294 (Clockwise)
Preceding gene: 115350387
Following gene: 115350389
Centisome position: 10.67
GC content: 67.06
Gene sequence:
>768_bases ATGATCAGCGCGATCGGACGTTACGTCATCGGCGGCCTCGAGCGCGCGGGCTACGGCACGCGGCTGTTCGTGCGCCTCGT GCTGGAATTCTTCCCGCTGCTGCGCCGGCCGCGGCTGGTCACGAAGCAGATCCACTTCCTCGGCAATTATTCGTTCGTGA TCATTGCCGTGTCGGGCCTGTTCGTCGGCTTCGTGCTCGGCCTGCAGGGCTACTACACGCTGAACCGCTACGGGTCCGAG CAGGCGCTCGGCCTGCTGGTCGCGCTGTCGCTCGTGCGCGAGCTCGGCCCGGTCGTGACCGCGCTGCTGTTCGCGGGCCG CGCGGGCACGTCGCTCACGGCCGAGATCGGCCTGATGAAGGCCGGCGAGCAGCTCACCGCGCTCGAGATGATGGCCGTCG ACCCGATCAAGACGGTGATCGCGCCGCGCCTGTGGGCCGGCATCATCGCGATGCCGCTGCTCGCCGCGATCTTCAACGCG GTCGGCGTGCTCGGCGGGTATTTCGTCGGCGTCGTGCTGATCGGCGTCGATCCGGGCGCGTTCTGGTCGCAGATGCAGGG CGGGGTCCAGGTGTGGGCCGACGTCGGCAACGGCGTGATCAAGAGCATCGTGTTCGGGTTCGCCGTGACCTTCATTGCAC TGTTTCAAGGGTATGAAGCGAAGCCCACGCCCGAGGGCGTGTCGCGCGCGACGACCAAGACGGTCGTGTTCGCGTCGCTC GCCGTACTCGGCCTCGATTTCCTGCTGACCGCGCTGATGTTCAGCTAA
Upstream 100 bases:
>100_bases GCGTGCGGCAGTTCATCGACGGCGCGCCGGACGGCCCGTTCAAATTTCATTACACGAGCCCGCCGCTGGCAGCGGATTTC GGGCTCGGCGGAGGGCGCGC
Downstream 100 bases:
>100_bases GCCTCAGCCAAGCCAAATTTTGGGATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTGTTCGTGGTGGTGGG CTTCCTTGCGGTGCTGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNA VGVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTKTVVFASL AVLGLDFLLTALMFS
Sequences:
>Translated_255_residues MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNA VGVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTKTVVFASL AVLGLDFLLTALMFS >Mature_255_residues MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNA VGVLGGYFVGVVLIGVDPGAFWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTKTVVFASL AVLGLDFLLTALMFS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=220, Percent_Identity=61.3636363636364, Blast_Score=268, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27185; Mature: 27185
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVLIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH FWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTKTVVFASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC >Mature Secondary Structure MISAIGRYVIGGLERAGYGTRLFVRLVLEFFPLLRRPRLVTKQIHFLGNYSFVIIAVSGL CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTALEMMAVDPIKTVIAPRLWAGIIAMPLLAAIFNAVGVLGGYFVGVVLIGVDPGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCH FWSQMQGGVQVWADVGNGVIKSIVFGFAVTFIALFQGYEAKPTPEGVSRATTKTVVFASL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]