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The map label for this gene is ugpA [H]

Identifier: 115350370

GI number: 115350370

Start: 356354

End: 357295

Strand: Direct

Name: ugpA [H]

Synonym: Bamb_0315

Alternate gene names: 115350370

Gene position: 356354-357295 (Clockwise)

Preceding gene: 115350369

Following gene: 115350371

Centisome position: 10.02

GC content: 65.5

Gene sequence:

>942_bases
ATGCGCGCGGGCCGGCGGCGCGGTTCCCTTTCCGTTTCGCCTGACCGGATGCCCGCGATGCAATCCCGTTCCCGTTTCGG
CGCGAGCCTGCTGCCGTACCTGCTGATCGCGCCGCAGCTCGCGATCACCGCCGTGTTCTTCCTGTGGCCGGCCGGCGTCG
CGCTGTGGCAGTCGACGCAGATGCAGGATGCGTTCGGCACGTCGAGCGAATTCGTCGGCTTCGCGAATTTCACGCACCTG
TTCGCCGATCCGCTGTACCTCGACTCGTTCCGCACGACACTGGTGTTCAGCTCGCTCGTCACGGTCAGCGGGCTCGTCGT
GTCGCTGCTGCTCGCCGCGTGCGCCGACCGCGTGGTTCGCGGCGCGCGCGTGTACCGCACGCTGCTGATCTGGCCGTATG
CGGTCGCGCCGACGATCGCCGCCGTGCTGTGGGCGTTCCTGTTCAACCCGAGCATCGGTCTCGTCACCTATGCGCTCGCA
AAGGGCGGCATTGTCTGGAATCACGCGTTGAACGGCAGCCAGGCGATGTTCCTCGTCGTGCTCGCGTCGGTGTGGAAGCA
GGTGAGCTACAACTTCCTGTTCTTCTATGCGGGGCTCCAGGCGATTCCGCGCTCGCTGATCGAGGCGGCGGCGATCGACG
GTGCCGGGCCGGTGCGGCGTTTCTTCAACATCGTGCTGCCGCTGCTGTCGCCGACGAGCTTCTTCCTGCTCGTCGTGAAC
CTCGTCTACGCGTTCTTCGACACGTTCCCGGTGATCGACGCTGCCACCGCGGGCGGCCCCGCGCAAAGCACCAAGACGCT
GATCTACAAGATCTTCACGGAAGGCTTCCAGGGGCTCGACATCGGCAGTTCGGGCGCGCAGTCGGTCGTGCTGATGATCA
TCGTCGTCGGGCTCACGGTGATCCAGTTCCGCTTCGTCGAACGCAGGGTGCAATACGCATGA

Upstream 100 bases:

>100_bases
CGACTCGGCCGCCTCGCGCGGCGACGAGCTGCTGCGCCGCTTCGAGAAGTCGGGCGGCTGATCCCGCATCGCGTCCGTGC
CGCCGGCCGCCGCCTCGCGC

Downstream 100 bases:

>100_bases
TCGAAAATCGCAAGGGTTTCGACCTGTTCTGCCACGCGGTGCTGGTCGCGGGCGTCGTGGCGATCGTGTTCCCCGTCTAC
GTCGCATTCTGCGCGGCTAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRAGRRRGSLSVSPDRMPAMQSRSRFGASLLPYLLIAPQLAITAVFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFTHL
FADPLYLDSFRTTLVFSSLVTVSGLVVSLLLAACADRVVRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLVTYALA
KGGIVWNHALNGSQAMFLVVLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVN
LVYAFFDTFPVIDAATAGGPAQSTKTLIYKIFTEGFQGLDIGSSGAQSVVLMIIVVGLTVIQFRFVERRVQYA

Sequences:

>Translated_313_residues
MRAGRRRGSLSVSPDRMPAMQSRSRFGASLLPYLLIAPQLAITAVFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFTHL
FADPLYLDSFRTTLVFSSLVTVSGLVVSLLLAACADRVVRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLVTYALA
KGGIVWNHALNGSQAMFLVVLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVN
LVYAFFDTFPVIDAATAGGPAQSTKTLIYKIFTEGFQGLDIGSSGAQSVVLMIIVVGLTVIQFRFVERRVQYA
>Mature_313_residues
MRAGRRRGSLSVSPDRMPAMQSRSRFGASLLPYLLIAPQLAITAVFFLWPAGVALWQSTQMQDAFGTSSEFVGFANFTHL
FADPLYLDSFRTTLVFSSLVTVSGLVVSLLLAACADRVVRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLVTYALA
KGGIVWNHALNGSQAMFLVVLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVN
LVYAFFDTFPVIDAATAGGPAQSTKTLIYKIFTEGFQGLDIGSSGAQSVVLMIIVVGLTVIQFRFVERRVQYA

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=69.4158075601375, Blast_Score=391, Evalue=1e-110,
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=32, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787570, Length=240, Percent_Identity=31.25, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34163; Mature: 34163

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGRRRGSLSVSPDRMPAMQSRSRFGASLLPYLLIAPQLAITAVFFLWPAGVALWQSTQ
CCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDAFGTSSEFVGFANFTHLFADPLYLDSFRTTLVFSSLVTVSGLVVSLLLAACADRVVR
HHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLVTYALAKGGIVWNHALNGSQAMFLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHH
LASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
LVYAFFDTFPVIDAATAGGPAQSTKTLIYKIFTEGFQGLDIGSSGAQSVVLMIIVVGLTV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IQFRFVERRVQYA
HHHHHHHHHHCCC
>Mature Secondary Structure
MRAGRRRGSLSVSPDRMPAMQSRSRFGASLLPYLLIAPQLAITAVFFLWPAGVALWQSTQ
CCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQDAFGTSSEFVGFANFTHLFADPLYLDSFRTTLVFSSLVTVSGLVVSLLLAACADRVVR
HHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLVTYALAKGGIVWNHALNGSQAMFLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHH
LASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
LVYAFFDTFPVIDAATAGGPAQSTKTLIYKIFTEGFQGLDIGSSGAQSVVLMIIVVGLTV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
IQFRFVERRVQYA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA