The gene/protein map for NC_000917 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is 115350364

Identifier: 115350364

GI number: 115350364

Start: 349440

End: 350312

Strand: Direct

Name: 115350364

Synonym: Bamb_0309

Alternate gene names: NA

Gene position: 349440-350312 (Clockwise)

Preceding gene: 115350363

Following gene: 115350365

Centisome position: 9.83

GC content: 72.28

Gene sequence:

>873_bases
ATGACGGCGATCGTGCATAGGTCCGTGCCGCGCGTTGCCGGGGCGCTTGGCCACGTGACGCGGGTGTCGCCGGCCACCGC
GCACGCCGTCGGCTGCGTGGTGGCATTCGTGTCCGTGCTGCTGGGCGGCATTCATCTGATGGATGCCGGCGACTGGAGCG
GGCTCACGCGCAGTCGCGCATTGCTGGCGACGGCACAGGTGCGTGCCGCTGAAACGCAGCGCGCACTCGCCGCCGCGCAA
CGGCACGACCCGGCCCCGGGCTCGGTTGCCGGGCGCAATGTCAGCGCGACGCGTGCGCCGGCGTGGCCCGCGCTGATGCT
GGAACTGGCCGACCTGGCCGGAGTGAGCGGACTGCGGATCGTGTCGATCGAACCGCAGCGCGCCGACGATGCGGCACCGG
ACGGCCGACGCACGGTGCGGATGGTCGCGGACGGCGGCTTTCCGGCGCTGTTGCGGCTGATGGGCGGGCTGGCAGGGTTG
CCCGCGCTGGTGGTGCCGTCGGTCCTGCATATCGAACGAAAACCGCCCACGGCGCGGGTCGACATGACGATCGACGTATT
TCCGGCGCTCCCGGGAGCCCGTTTGCCGGGTGGCGCGGCGCCCATGCTCGCCGGTGCGTCAGGCGACGATCCATTCGGCG
GCGCGGGTTCGCTTCCGGTAGCCGACGATGCGGTGCCGCGTCTGGCCGGCACGATTCGCGACGCGCGCGCCGGGCTTGCG
TTGTTCGACGCCGGTGACGGCGGGTTCGCGACCGTCGCGCGGGGCGAAGCGCTTGGGGCCGCGCGGGTGATGCGCGTCGA
AGCCGATGCCGTAACGCTTGCAACGGCCGATGGCGCGCGCCGGTTCGTCATGGACGACGGAGGTCGTCCATGA

Upstream 100 bases:

>100_bases
CTTCGGCCATGCCGGTCACGGCGTCAGCCGCGCCGTTCCGGTTTTCCGTACAGGTGCGCTGGCACGACGCGTCGCCGCAA
GGCGCAGCGGGAGGCGGCGC

Downstream 100 bases:

>100_bases
CGAAATACGGATGGTGGGCGATCGCATTCCAGGTCGCATCATGCATGGCCGCGGCACACGCGGCGCTACCGCCTTTGCCT
CCGTTGCCCCCTTTGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTAIVHRSVPRVAGALGHVTRVSPATAHAVGCVVAFVSVLLGGIHLMDAGDWSGLTRSRALLATAQVRAAETQRALAAAQ
RHDPAPGSVAGRNVSATRAPAWPALMLELADLAGVSGLRIVSIEPQRADDAAPDGRRTVRMVADGGFPALLRLMGGLAGL
PALVVPSVLHIERKPPTARVDMTIDVFPALPGARLPGGAAPMLAGASGDDPFGGAGSLPVADDAVPRLAGTIRDARAGLA
LFDAGDGGFATVARGEALGAARVMRVEADAVTLATADGARRFVMDDGGRP

Sequences:

>Translated_290_residues
MTAIVHRSVPRVAGALGHVTRVSPATAHAVGCVVAFVSVLLGGIHLMDAGDWSGLTRSRALLATAQVRAAETQRALAAAQ
RHDPAPGSVAGRNVSATRAPAWPALMLELADLAGVSGLRIVSIEPQRADDAAPDGRRTVRMVADGGFPALLRLMGGLAGL
PALVVPSVLHIERKPPTARVDMTIDVFPALPGARLPGGAAPMLAGASGDDPFGGAGSLPVADDAVPRLAGTIRDARAGLA
LFDAGDGGFATVARGEALGAARVMRVEADAVTLATADGARRFVMDDGGRP
>Mature_289_residues
TAIVHRSVPRVAGALGHVTRVSPATAHAVGCVVAFVSVLLGGIHLMDAGDWSGLTRSRALLATAQVRAAETQRALAAAQR
HDPAPGSVAGRNVSATRAPAWPALMLELADLAGVSGLRIVSIEPQRADDAAPDGRRTVRMVADGGFPALLRLMGGLAGLP
ALVVPSVLHIERKPPTARVDMTIDVFPALPGARLPGGAAPMLAGASGDDPFGGAGSLPVADDAVPRLAGTIRDARAGLAL
FDAGDGGFATVARGEALGAARVMRVEADAVTLATADGARRFVMDDGGRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29344; Mature: 29213

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIVHRSVPRVAGALGHVTRVSPATAHAVGCVVAFVSVLLGGIHLMDAGDWSGLTRSRA
CCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
LLATAQVRAAETQRALAAAQRHDPAPGSVAGRNVSATRAPAWPALMLELADLAGVSGLRI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VSIEPQRADDAAPDGRRTVRMVADGGFPALLRLMGGLAGLPALVVPSVLHIERKPPTARV
EEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEEE
DMTIDVFPALPGARLPGGAAPMLAGASGDDPFGGAGSLPVADDAVPRLAGTIRDARAGLA
EEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEE
LFDAGDGGFATVARGEALGAARVMRVEADAVTLATADGARRFVMDDGGRP
EEECCCCCEEEEECCCHHCCEEEEEEECCEEEEEECCCCEEEEECCCCCC
>Mature Secondary Structure 
TAIVHRSVPRVAGALGHVTRVSPATAHAVGCVVAFVSVLLGGIHLMDAGDWSGLTRSRA
CCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
LLATAQVRAAETQRALAAAQRHDPAPGSVAGRNVSATRAPAWPALMLELADLAGVSGLRI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VSIEPQRADDAAPDGRRTVRMVADGGFPALLRLMGGLAGLPALVVPSVLHIERKPPTARV
EEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEEE
DMTIDVFPALPGARLPGGAAPMLAGASGDDPFGGAGSLPVADDAVPRLAGTIRDARAGLA
EEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEE
LFDAGDGGFATVARGEALGAARVMRVEADAVTLATADGARRFVMDDGGRP
EEECCCCCEEEEECCCHHCCEEEEEEECCEEEEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA