Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350362

Identifier: 115350362

GI number: 115350362

Start: 347891

End: 348814

Strand: Direct

Name: 115350362

Synonym: Bamb_0307

Alternate gene names: NA

Gene position: 347891-348814 (Clockwise)

Preceding gene: 115350360

Following gene: 115350363

Centisome position: 9.78

GC content: 75.43

Gene sequence:

>924_bases
ATGACAGCACGATGGGCGGCGCGGTTCGCGCCGGGCAGGCACCGTTCGACGGGCATCGACGTCGGGGCGGACGAGGTGAG
AGTAGCCGTGCTGAGCCGGCGCGGCCGGGGCGCGGATGTGCGGGTCGAAGGGCTCGAGCGGGAGCCGGTGGGACTCGCGG
ACGGGCCGGAGGACGCGCGCTGGGCCGCGGTCGCGCGGGCGCTGGCGGCCGCCGTGTCGCGGCTGTCGGCGGCAGGCGTG
CGCTGCGACGCGCATGGCGTGATGGCGCTGCGCGACGACGAAATGCGCACGGCAACGCTCGACCTGGCCGGGCGCGAGGA
CGTCGCCCACGCCGCCCGGCAGGCGGCCGAACGCATCTCGGGGCTGGCGCCGGACAGTTTCGCGTTCGACTGGCGGCAGG
AAGGCGGCGAACATTCGGGCGAGATCGCGGTCGCCGTGGCGCCGCAGGCCTTGCTCGAGCGGCGGGTCGACGTGGCCGCG
CAGGCCGGCATCGACCTGACGGCCGTCGACGGCGAGTCGGCCGCCGCGCTGCGCGCATTGCGCCATGCCGCGCAGTTCGA
GCTCGACGCGCACGGCCCGTACGCCGCATTCTGGTTCGGCGACACGGGTGTGCGCGGCTGGCGGGTCGACGGCCCGGTCG
CCGCACCTGTGCTCGCGGTATCCGGCGACGTGCAGGCGGCGCTCCCCGACGCATTGCGCCAGTGCGTATTCGAGCCGGTG
CGCTGCGTGCTCGTGGCCGGCGACGCGCGCTGCATCGCCCGCTGCGGTACGTCGGTCGCCGACATCGGAGATGCACTCGG
CGTGGCGGCGGTGCCGTTCGACTGCACGGGATGGAACGGGCTGCCGGGCGAGCCCGGCGGTGTGCCGGACGCTGCGGCAT
TTGCGCTCGCGGTCGGGCTGGCGCTGCGCGGGGTGTGGGAATGA

Upstream 100 bases:

>100_bases
CCACGCCTGGCCGTCCGGCCGACTGTCGGAGGCACGCGCCACTTTGCAGAATCAGGCATCGGAAACGCGGCGTGGGCCGC
AACGAGCGCGGGAGGCTGGG

Downstream 100 bases:

>100_bases
TGGCCGATACGGGGTTCGGGCGGACTAGCGCCGGCCACGCCGCGCTCGGCGGCTTCAATCTGCTGCCGTACCGGGAGCGG
CTGGCGCACGCGTTGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTARWAARFAPGRHRSTGIDVGADEVRVAVLSRRGRGADVRVEGLEREPVGLADGPEDARWAAVARALAAAVSRLSAAGV
RCDAHGVMALRDDEMRTATLDLAGREDVAHAARQAAERISGLAPDSFAFDWRQEGGEHSGEIAVAVAPQALLERRVDVAA
QAGIDLTAVDGESAAALRALRHAAQFELDAHGPYAAFWFGDTGVRGWRVDGPVAAPVLAVSGDVQAALPDALRQCVFEPV
RCVLVAGDARCIARCGTSVADIGDALGVAAVPFDCTGWNGLPGEPGGVPDAAAFALAVGLALRGVWE

Sequences:

>Translated_307_residues
MTARWAARFAPGRHRSTGIDVGADEVRVAVLSRRGRGADVRVEGLEREPVGLADGPEDARWAAVARALAAAVSRLSAAGV
RCDAHGVMALRDDEMRTATLDLAGREDVAHAARQAAERISGLAPDSFAFDWRQEGGEHSGEIAVAVAPQALLERRVDVAA
QAGIDLTAVDGESAAALRALRHAAQFELDAHGPYAAFWFGDTGVRGWRVDGPVAAPVLAVSGDVQAALPDALRQCVFEPV
RCVLVAGDARCIARCGTSVADIGDALGVAAVPFDCTGWNGLPGEPGGVPDAAAFALAVGLALRGVWE
>Mature_306_residues
TARWAARFAPGRHRSTGIDVGADEVRVAVLSRRGRGADVRVEGLEREPVGLADGPEDARWAAVARALAAAVSRLSAAGVR
CDAHGVMALRDDEMRTATLDLAGREDVAHAARQAAERISGLAPDSFAFDWRQEGGEHSGEIAVAVAPQALLERRVDVAAQ
AGIDLTAVDGESAAALRALRHAAQFELDAHGPYAAFWFGDTGVRGWRVDGPVAAPVLAVSGDVQAALPDALRQCVFEPVR
CVLVAGDARCIARCGTSVADIGDALGVAAVPFDCTGWNGLPGEPGGVPDAAAFALAVGLALRGVWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31835; Mature: 31704

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARWAARFAPGRHRSTGIDVGADEVRVAVLSRRGRGADVRVEGLEREPVGLADGPEDAR
CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHH
WAAVARALAAAVSRLSAAGVRCDAHGVMALRDDEMRTATLDLAGREDVAHAARQAAERIS
HHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH
GLAPDSFAFDWRQEGGEHSGEIAVAVAPQALLERRVDVAAQAGIDLTAVDGESAAALRAL
CCCCCCCEEHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
RHAAQFELDAHGPYAAFWFGDTGVRGWRVDGPVAAPVLAVSGDVQAALPDALRQCVFEPV
HHHHHEEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
RCVLVAGDARCIARCGTSVADIGDALGVAAVPFDCTGWNGLPGEPGGVPDAAAFALAVGL
EEEEEECCHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ALRGVWE
HHHCCCC
>Mature Secondary Structure 
TARWAARFAPGRHRSTGIDVGADEVRVAVLSRRGRGADVRVEGLEREPVGLADGPEDAR
CCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHH
WAAVARALAAAVSRLSAAGVRCDAHGVMALRDDEMRTATLDLAGREDVAHAARQAAERIS
HHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHH
GLAPDSFAFDWRQEGGEHSGEIAVAVAPQALLERRVDVAAQAGIDLTAVDGESAAALRAL
CCCCCCCEEHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
RHAAQFELDAHGPYAAFWFGDTGVRGWRVDGPVAAPVLAVSGDVQAALPDALRQCVFEPV
HHHHHEEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
RCVLVAGDARCIARCGTSVADIGDALGVAAVPFDCTGWNGLPGEPGGVPDAAAFALAVGL
EEEEEECCHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ALRGVWE
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA