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The map label for this gene is nolR [H]

Identifier: 116249450

GI number: 116249450

Start: 860703

End: 861056

Strand: Reverse

Name: nolR [H]

Synonym: pRL120789

Alternate gene names: 116249450

Gene position: 861056-860703 (Counterclockwise)

Preceding gene: 116249451

Following gene: 116249449

Centisome position: 98.97

GC content: 57.63

Gene sequence:

>354_bases
TTGAACAATCAATCGTCAGCCGCGCCTTCCCCTGAAACCAACGCCTTCGACAACGAGGCAAACTTCCTCTCGGCCATGGG
GAATGCCAAACGACTTCACATTCTGCATCTGTTGGCCGAAGGAGAAATGTCCGTCAGCGTCCTGGCCGACGAGGTGGGAT
TGAGCCAATCTTCGACTTCCCAGCATTTGGCAATTCTTCGAGAACAGGAACTCGTGCAGACGCGAAGGGCTGCCCAGACG
ATCTACTATTCACTTCAATCCGCCGCGGCCACGGCGATGCTCGATACGCTCGCCGAGATCTTCGGATGGCATCCTCGCTC
CCCAGTGGAACGCGTCCGAGCCGTAGGCGCCTGA

Upstream 100 bases:

>100_bases
CCGATAATGGGTTTCGGCCCCGCACCCATGCGTTATCTCTAAATTAAAGCTCGGGGATAGACCAGGTACCCGGCTTTGAT
TCCCCAAAGGAGATCTCGCC

Downstream 100 bases:

>100_bases
CAAAATGACGAAGCGTTGCTCTTGCGGCTCATGATTGGAGCATGATCTTGTCGGCAACTCGGGATCGGTGCCGCGGCAAC
GAAGAGCAGCGCAATGGCGA

Product: putative nodulation protein NolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNNQSSAAPSPETNAFDNEANFLSAMGNAKRLHILHLLAEGEMSVSVLADEVGLSQSSTSQHLAILREQELVQTRRAAQT
IYYSLQSAAATAMLDTLAEIFGWHPRSPVERVRAVGA

Sequences:

>Translated_117_residues
MNNQSSAAPSPETNAFDNEANFLSAMGNAKRLHILHLLAEGEMSVSVLADEVGLSQSSTSQHLAILREQELVQTRRAAQT
IYYSLQSAAATAMLDTLAEIFGWHPRSPVERVRAVGA
>Mature_117_residues
MNNQSSAAPSPETNAFDNEANFLSAMGNAKRLHILHLLAEGEMSVSVLADEVGLSQSSTSQHLAILREQELVQTRRAAQT
IYYSLQSAAATAMLDTLAEIFGWHPRSPVERVRAVGA

Specific function: Negative transacting factor controlling the nod regulon. May control the expression of nodD1, nodD2, nodD3 and nodABC genes [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12665; Mature: 12665

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQSSAAPSPETNAFDNEANFLSAMGNAKRLHILHLLAEGEMSVSVLADEVGLSQSSTS
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
QHLAILREQELVQTRRAAQTIYYSLQSAAATAMLDTLAEIFGWHPRSPVERVRAVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MNNQSSAAPSPETNAFDNEANFLSAMGNAKRLHILHLLAEGEMSVSVLADEVGLSQSSTS
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
QHLAILREQELVQTRRAAQTIYYSLQSAAATAMLDTLAEIFGWHPRSPVERVRAVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1840615 [H]