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The map label for this gene is yvrE [H]

Identifier: 116249439

GI number: 116249439

Start: 847730

End: 848620

Strand: Reverse

Name: yvrE [H]

Synonym: pRL120777

Alternate gene names: 116249439

Gene position: 848620-847730 (Counterclockwise)

Preceding gene: 116249440

Following gene: 116249438

Centisome position: 97.54

GC content: 63.41

Gene sequence:

>891_bases
ATGACGGCGCCTCGGATCATCCGCCCGGACGTCCGTTCCGTTATCCAGCAACCGCTGACGGTCGGTGAATCGCCGGTATG
GGACGAGGAGACCGGTACTCTGTGGTTCGTCGATATTCTGGCGCCGGCACTCGTCCGGCTTTCGCCTTCAGGAAAGATCG
ACCGCTTCGACATGCCGGCTGCAATCGGCGCCCTCGGGCTTTGCCGCGATCACAGGATCGTCGTGGCGCTTCAGACGGGC
GTCCATCTCTTCGATCCCGTCTCAAGAGATTTCGAATTTCTGTGCGATCCGGTCGGACGCGACATCAATTGCCGCCTCAA
TGATGGAAAGGTCGGCCCCGACGGGCACTTCTGGATCGGCTCGTTCAGCGAAGCCAAGCCGCAGACCGATGAGGCCGCAC
TTTACCGCGTGGGCGCCGATGGCCGCACCCGGACCGTTGCAACCGGACTGACGAGCTCCAACGGCCTTGCCTGGTCGCCG
GACGGCCGGCGGATGTATCATTCCGACAGCCGGCAATGCTTCTTGCAGGCATTCGACTTCGATCCTGATACGGGCGACCT
CGGCGATGGGCGCCGGCTTCGTAGCTTCACGGAAGACGAGGGTCGGCCGGACGGAGCGACAACCGATCGTGACGGGTTCT
ACTGGAGTGCCGGCGTTTCCGCCGGTCGCCTCAACCGAATATCGCCCGAAGGCGAAATCGTCGAAATCTACATTCTGCCA
GTCCCCGCACCGACGATGCCGTGTTTCGGAGGGCCGAATCTGCGCGCCCTCTTCGTCACGAGCCTGTCGACGGACCGCTC
CGGACGTTTCGAAGCGGGGACGGTGATCGCCTTCGACGTGGATGCAGAGGGCCTGCCGCCCTTCCGCTTCGGGGATCATC
CCGTCGGATGA

Upstream 100 bases:

>100_bases
CGCTGGCGTTCCAGGGTGGCGGGTTCTGTGAGATCAATCACGACGGCACCATCCGCATGCGCGACGCCGATGGCTTGGCC
AAGAGCCCGGAGACGGTTGA

Downstream 100 bases:

>100_bases
CAGCGTGCCGATCACCCCGGGTGACGGCGTGCCGATCACCCTTCGGGTGACGGCGGATTGATGGAAAGATAACGGGGAAG
AAAGATGAGCATCGCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTAPRIIRPDVRSVIQQPLTVGESPVWDEETGTLWFVDILAPALVRLSPSGKIDRFDMPAAIGALGLCRDHRIVVALQTG
VHLFDPVSRDFEFLCDPVGRDINCRLNDGKVGPDGHFWIGSFSEAKPQTDEAALYRVGADGRTRTVATGLTSSNGLAWSP
DGRRMYHSDSRQCFLQAFDFDPDTGDLGDGRRLRSFTEDEGRPDGATTDRDGFYWSAGVSAGRLNRISPEGEIVEIYILP
VPAPTMPCFGGPNLRALFVTSLSTDRSGRFEAGTVIAFDVDAEGLPPFRFGDHPVG

Sequences:

>Translated_296_residues
MTAPRIIRPDVRSVIQQPLTVGESPVWDEETGTLWFVDILAPALVRLSPSGKIDRFDMPAAIGALGLCRDHRIVVALQTG
VHLFDPVSRDFEFLCDPVGRDINCRLNDGKVGPDGHFWIGSFSEAKPQTDEAALYRVGADGRTRTVATGLTSSNGLAWSP
DGRRMYHSDSRQCFLQAFDFDPDTGDLGDGRRLRSFTEDEGRPDGATTDRDGFYWSAGVSAGRLNRISPEGEIVEIYILP
VPAPTMPCFGGPNLRALFVTSLSTDRSGRFEAGTVIAFDVDAEGLPPFRFGDHPVG
>Mature_295_residues
TAPRIIRPDVRSVIQQPLTVGESPVWDEETGTLWFVDILAPALVRLSPSGKIDRFDMPAAIGALGLCRDHRIVVALQTGV
HLFDPVSRDFEFLCDPVGRDINCRLNDGKVGPDGHFWIGSFSEAKPQTDEAALYRVGADGRTRTVATGLTSSNGLAWSPD
GRRMYHSDSRQCFLQAFDFDPDTGDLGDGRRLRSFTEDEGRPDGATTDRDGFYWSAGVSAGRLNRISPEGEIVEIYILPV
PAPTMPCFGGPNLRALFVTSLSTDRSGRFEAGTVIAFDVDAEGLPPFRFGDHPVG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=293, Percent_Identity=29.6928327645051, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI4759036, Length=293, Percent_Identity=29.6928327645051, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24641471, Length=263, Percent_Identity=28.1368821292776, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI18860103, Length=263, Percent_Identity=28.1368821292776, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24641469, Length=263, Percent_Identity=28.1368821292776, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI45551448, Length=263, Percent_Identity=28.1368821292776, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646912, Length=273, Percent_Identity=27.4725274725275, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646910, Length=273, Percent_Identity=27.4725274725275, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32301; Mature: 32169

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRIIRPDVRSVIQQPLTVGESPVWDEETGTLWFVDILAPALVRLSPSGKIDRFDMPA
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHEEECCCCCCCCCCCCH
AIGALGLCRDHRIVVALQTGVHLFDPVSRDFEFLCDPVGRDINCRLNDGKVGPDGHFWIG
HHHHHHCCCCCEEEEEEECCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEC
SFSEAKPQTDEAALYRVGADGRTRTVATGLTSSNGLAWSPDGRRMYHSDSRQCFLQAFDF
CCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEECCCCCEEEEEEECC
DPDTGDLGDGRRLRSFTEDEGRPDGATTDRDGFYWSAGVSAGRLNRISPEGEIVEIYILP
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
VPAPTMPCFGGPNLRALFVTSLSTDRSGRFEAGTVIAFDVDAEGLPPFRFGDHPVG
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAPRIIRPDVRSVIQQPLTVGESPVWDEETGTLWFVDILAPALVRLSPSGKIDRFDMPA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHEEECCCCCCCCCCCCH
AIGALGLCRDHRIVVALQTGVHLFDPVSRDFEFLCDPVGRDINCRLNDGKVGPDGHFWIG
HHHHHHCCCCCEEEEEEECCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEC
SFSEAKPQTDEAALYRVGADGRTRTVATGLTSSNGLAWSPDGRRMYHSDSRQCFLQAFDF
CCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEECCCCCEEEEEEECC
DPDTGDLGDGRRLRSFTEDEGRPDGATTDRDGFYWSAGVSAGRLNRISPEGEIVEIYILP
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEE
VPAPTMPCFGGPNLRALFVTSLSTDRSGRFEAGTVIAFDVDAEGLPPFRFGDHPVG
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]