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The map label for this gene is rutD [H]

Identifier: 116249432

GI number: 116249432

Start: 840543

End: 841388

Strand: Direct

Name: rutD [H]

Synonym: pRL120770

Alternate gene names: 116249432

Gene position: 840543-841388 (Clockwise)

Preceding gene: 116249429

Following gene: 116249442

Centisome position: 96.61

GC content: 58.39

Gene sequence:

>846_bases
GTGACTGAACGTATGATCAAGTTTGACGACGTCGAGATTGCCACGCAGGCTTTCGGCAACCCGGCGCATGAGCCGATCCT
GCTCATCATGGGCGCCATGGCTTCAATGTTGTGGTGGCCGGACGGCTTCTGCCAAAAGCTTGCTGATCACGAGTTTTATG
TCATCCGCTACGACAATCGAGACACCGGCCGCTCGACGATCTACCCGCCGGGGGAGCCGCCCTATGCAATGGACGACATG
GCCGAGGACGCCATAAGGGTACTCGATGGCTACGGCTTAGACCGCGCCAATCTGATCGGAATGTCGTTGGGCGGCACGAT
CGCCCAGATCGCCGCACTGTCAAATCCGAAGCGCGTCAAGACACTAACGCTGATCTCCACCTCACCGGTGGGCGTTGATA
CCAGCGCTCTACCCCATACCACCGACGCCTACATGGAGCACGCAGCGACGGGTGAGCACGTCGATTGGACAGACAATGCC
CAAGTGATCGAATTCCTCCTAAAAGATACCCAGATGATCGCCGGTTCGGCGCACCTTTACGACGGACGGCAGGCGCGCGC
CTTCGTTGAACGTGACGTCAAACGGGCCAAAAACTTCGTCAGCGCCACCAATCATTTCATGCTGAAGGGCGGCCAGGCCT
TAAAGGGCAAACTGGCCGAACTTGCTGCGCCCCTCCTTGTCATACACGGAACGGCCGATCCAATTTATCCCGTTGAGCAC
GGCGAATTGCTGGCACGAACCGTCAAGGGAGCGAAGCTCATTCGGATCGAGGGCGGTGGCCACGAAATTCATCTCCAGGA
TTGGCGGGAGATCACTTCTGCCATCGACGCCCATTGCCGTCCGTAG

Upstream 100 bases:

>100_bases
AGAGGATAGGGAACACGCAGACGTCGAGTGACGTTCGCGTGAAAGCCTGCAGGTACGAAGATTTCGCTGCTTCACCCAAG
CCAAGAAAGGATGCCGCCAA

Downstream 100 bases:

>100_bases
CTTGATGGCATTAGGAACCAGGCAGGCCGTGCCGACCAACAGCTACGCCCTTCCGTACATCCGGCTCGCGCGCAGCAGGC
GTTGCGAGTAGGGGTGTTCG

Product: putative streptothricin-acetyl-transferase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTERMIKFDDVEIATQAFGNPAHEPILLIMGAMASMLWWPDGFCQKLADHEFYVIRYDNRDTGRSTIYPPGEPPYAMDDM
AEDAIRVLDGYGLDRANLIGMSLGGTIAQIAALSNPKRVKTLTLISTSPVGVDTSALPHTTDAYMEHAATGEHVDWTDNA
QVIEFLLKDTQMIAGSAHLYDGRQARAFVERDVKRAKNFVSATNHFMLKGGQALKGKLAELAAPLLVIHGTADPIYPVEH
GELLARTVKGAKLIRIEGGGHEIHLQDWREITSAIDAHCRP

Sequences:

>Translated_281_residues
MTERMIKFDDVEIATQAFGNPAHEPILLIMGAMASMLWWPDGFCQKLADHEFYVIRYDNRDTGRSTIYPPGEPPYAMDDM
AEDAIRVLDGYGLDRANLIGMSLGGTIAQIAALSNPKRVKTLTLISTSPVGVDTSALPHTTDAYMEHAATGEHVDWTDNA
QVIEFLLKDTQMIAGSAHLYDGRQARAFVERDVKRAKNFVSATNHFMLKGGQALKGKLAELAAPLLVIHGTADPIYPVEH
GELLARTVKGAKLIRIEGGGHEIHLQDWREITSAIDAHCRP
>Mature_280_residues
TERMIKFDDVEIATQAFGNPAHEPILLIMGAMASMLWWPDGFCQKLADHEFYVIRYDNRDTGRSTIYPPGEPPYAMDDMA
EDAIRVLDGYGLDRANLIGMSLGGTIAQIAALSNPKRVKTLTLISTSPVGVDTSALPHTTDAYMEHAATGEHVDWTDNAQ
VIEFLLKDTQMIAGSAHLYDGRQARAFVERDVKRAKNFVSATNHFMLKGGQALKGKLAELAAPLLVIHGTADPIYPVEHG
ELLARTVKGAKLIRIEGGGHEIHLQDWREITSAIDAHCRP

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30917; Mature: 30785

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERMIKFDDVEIATQAFGNPAHEPILLIMGAMASMLWWPDGFCQKLADHEFYVIRYDNR
CCCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCC
DTGRSTIYPPGEPPYAMDDMAEDAIRVLDGYGLDRANLIGMSLGGTIAQIAALSNPKRVK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHCCCCCCEE
TLTLISTSPVGVDTSALPHTTDAYMEHAATGEHVDWTDNAQVIEFLLKDTQMIAGSAHLY
EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEC
DGRQARAFVERDVKRAKNFVSATNHFMLKGGQALKGKLAELAAPLLVIHGTADPIYPVEH
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCC
GELLARTVKGAKLIRIEGGGHEIHLQDWREITSAIDAHCRP
HHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TERMIKFDDVEIATQAFGNPAHEPILLIMGAMASMLWWPDGFCQKLADHEFYVIRYDNR
CCCCEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCC
DTGRSTIYPPGEPPYAMDDMAEDAIRVLDGYGLDRANLIGMSLGGTIAQIAALSNPKRVK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHCCCCCCEE
TLTLISTSPVGVDTSALPHTTDAYMEHAATGEHVDWTDNAQVIEFLLKDTQMIAGSAHLY
EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEC
DGRQARAFVERDVKRAKNFVSATNHFMLKGGQALKGKLAELAAPLLVIHGTADPIYPVEH
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCC
GELLARTVKGAKLIRIEGGGHEIHLQDWREITSAIDAHCRP
HHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA