| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249391
Identifier: 116249391
GI number: 116249391
Start: 795349
End: 795579
Strand: Direct
Name: 116249391
Synonym: pRL120729
Alternate gene names: NA
Gene position: 795349-795579 (Clockwise)
Preceding gene: 116249389
Following gene: 116249392
Centisome position: 91.42
GC content: 55.41
Gene sequence:
>231_bases ATGACCTTGAAAACCTCGGGGGAGAAATCTCAACCCCATGAATTCATCTTTCCGGTTCACACCCGGACGATCGCAGAGAT CAGGTACAATAGTCTCAGCCGCATCATGACGGTGGTCTATCACGACGGCCATTCCTGCACCACTTCCGGCATACAAGGCC CCGCAATGCTGAGGATCCTCGCCCAGCGTCCGTTGGAGCGCTCTCCGTTTCTGTTGCAGACGGTCATCTGA
Upstream 100 bases:
>100_bases TGTCACGCGACCGTCGCAGCAATATGTGCTTGATAGACACCGTTAGGCTCAGACCAGGGCGCGGTGGGGCTAAAATTGCT TTTTTCGTTGGGGCATCGCA
Downstream 100 bases:
>100_bases GGGGGAAAAGACTGGCCGACCCTTGTCGGCCAGTGCGTGCGTATAGGGTCGCCGCTTGTTAAATCGGCATGATCGTGCAT CCATTTCCCGCGGCCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTLKTSGEKSQPHEFIFPVHTRTIAEIRYNSLSRIMTVVYHDGHSCTTSGIQGPAMLRILAQRPLERSPFLLQTVI
Sequences:
>Translated_76_residues MTLKTSGEKSQPHEFIFPVHTRTIAEIRYNSLSRIMTVVYHDGHSCTTSGIQGPAMLRILAQRPLERSPFLLQTVI >Mature_75_residues TLKTSGEKSQPHEFIFPVHTRTIAEIRYNSLSRIMTVVYHDGHSCTTSGIQGPAMLRILAQRPLERSPFLLQTVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8609; Mature: 8478
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKTSGEKSQPHEFIFPVHTRTIAEIRYNSLSRIMTVVYHDGHSCTTSGIQGPAMLRIL CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH AQRPLERSPFLLQTVI HHCCCCCCCEEEEECC >Mature Secondary Structure TLKTSGEKSQPHEFIFPVHTRTIAEIRYNSLSRIMTVVYHDGHSCTTSGIQGPAMLRIL CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHH AQRPLERSPFLLQTVI HHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA