| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
Click here to switch to the map view.
The map label for this gene is 116249392
Identifier: 116249392
GI number: 116249392
Start: 795716
End: 795979
Strand: Direct
Name: 116249392
Synonym: pRL120730
Alternate gene names: NA
Gene position: 795716-795979 (Clockwise)
Preceding gene: 116249391
Following gene: 116249395
Centisome position: 91.46
GC content: 60.23
Gene sequence:
>264_bases ATGACCTTTCCACCACCGAAGACCGAATCTCCCGCGCAGCGCTTCGAAGAGGCGACCGCTGCCGCACGCGACGCTTTGGA AAGGCTGATTGCAGCCGCCAATGAAGCTGGATGGGGCACCGAGGAGATAACTGCGGCACTGCTTAAGGCCGCGCAGTTTC TGAGCGATGCCAACAAGAGAGATCCCGATCCGGCCGATGATCCCTCCATCAGCGACGCACCTGCCAGACAGGAGCAGATT GGTCACGGCGAGCTCTACGATTAG
Upstream 100 bases:
>100_bases GTGCGTATAGGGTCGCCGCTTGTTAAATCGGCATGATCGTGCATCCATTTCCCGCGGCCTGCGTTCATCCCCAATAGCCA GACACATGGAGGGAACGCCG
Downstream 100 bases:
>100_bases AGGGCGTAGCGCTGGTTTTCCAACGCAATGAGACAAGGGTTGCCGGAATTCATGTCGAGTGTCACACGTCTTTGCTCTCG GAACCCGTTCGCAATATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTFPPPKTESPAQRFEEATAAARDALERLIAAANEAGWGTEEITAALLKAAQFLSDANKRDPDPADDPSISDAPARQEQI GHGELYD
Sequences:
>Translated_87_residues MTFPPPKTESPAQRFEEATAAARDALERLIAAANEAGWGTEEITAALLKAAQFLSDANKRDPDPADDPSISDAPARQEQI GHGELYD >Mature_86_residues TFPPPKTESPAQRFEEATAAARDALERLIAAANEAGWGTEEITAALLKAAQFLSDANKRDPDPADDPSISDAPARQEQIG HGELYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9336; Mature: 9205
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPPPKTESPAQRFEEATAAARDALERLIAAANEAGWGTEEITAALLKAAQFLSDANKR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC DPDPADDPSISDAPARQEQIGHGELYD CCCCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure TFPPPKTESPAQRFEEATAAARDALERLIAAANEAGWGTEEITAALLKAAQFLSDANKR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC DPDPADDPSISDAPARQEQIGHGELYD CCCCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA