The gene/protein map for NC_008378 is currently unavailable.
Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

Click here to switch to the map view.

The map label for this gene is 116249382

Identifier: 116249382

GI number: 116249382

Start: 788469

End: 788774

Strand: Reverse

Name: 116249382

Synonym: pRL120720

Alternate gene names: NA

Gene position: 788774-788469 (Counterclockwise)

Preceding gene: 116249383

Following gene: 116249379

Centisome position: 90.66

GC content: 56.21

Gene sequence:

>306_bases
ATGAAGCGCTATAGTATCCGCCTTACTGATGAGGCGGAATTGGATTTGGCGAGCATCTATAGTTTCGTCCGCAAGACATC
CGCATCTTCTACCGTCGCCCGCGATTACGTGGCACGGATCAAGACCTTTGTAAGTGGATTCGAAACGTACCCCGAGCGCG
GCAGCATCCGCGATCATGTCCGACCCGGGTTACGCATTGTCGGTTTCGAGAGCCGTGTAAGCGTGGCGTTCGTGGTTGAG
CCCACCGAGGTTGTTGTCCTCCGCATCCTCTATGCCGGGCGGCAGTTTGAAAGCGACGAGGGTTAG

Upstream 100 bases:

>100_bases
ATGATGCCTACAAGGCCGATCCCACCAAGGCCAAGCCCCTCGATGAGGTCTGGAAGCGCCTCGAAGCGCGCATGGACGAA
ATCGATCGGGAAGAAGATTG

Downstream 100 bases:

>100_bases
AACTGGCCCAGAACGCAACACACCCAGTACATCCCCACTTCGATCGTCAAGCCGCCGCGACTTTGCCCGAGAGCGCCTGA
TCCATCGCTGCCTGAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE
PTEVVVLRILYAGRQFESDEG

Sequences:

>Translated_101_residues
MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE
PTEVVVLRILYAGRQFESDEG
>Mature_101_residues
MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE
PTEVVVLRILYAGRQFESDEG

Specific function: Unknown

COG id: COG3668

COG function: function code R; Plasmid stabilization system protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11452; Mature: 11452

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHV
CCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
RPGLRIVGFESRVSVAFVVEPTEVVVLRILYAGRQFESDEG
CCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHV
CCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC
RPGLRIVGFESRVSVAFVVEPTEVVVLRILYAGRQFESDEG
CCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA