| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249382
Identifier: 116249382
GI number: 116249382
Start: 788469
End: 788774
Strand: Reverse
Name: 116249382
Synonym: pRL120720
Alternate gene names: NA
Gene position: 788774-788469 (Counterclockwise)
Preceding gene: 116249383
Following gene: 116249379
Centisome position: 90.66
GC content: 56.21
Gene sequence:
>306_bases ATGAAGCGCTATAGTATCCGCCTTACTGATGAGGCGGAATTGGATTTGGCGAGCATCTATAGTTTCGTCCGCAAGACATC CGCATCTTCTACCGTCGCCCGCGATTACGTGGCACGGATCAAGACCTTTGTAAGTGGATTCGAAACGTACCCCGAGCGCG GCAGCATCCGCGATCATGTCCGACCCGGGTTACGCATTGTCGGTTTCGAGAGCCGTGTAAGCGTGGCGTTCGTGGTTGAG CCCACCGAGGTTGTTGTCCTCCGCATCCTCTATGCCGGGCGGCAGTTTGAAAGCGACGAGGGTTAG
Upstream 100 bases:
>100_bases ATGATGCCTACAAGGCCGATCCCACCAAGGCCAAGCCCCTCGATGAGGTCTGGAAGCGCCTCGAAGCGCGCATGGACGAA ATCGATCGGGAAGAAGATTG
Downstream 100 bases:
>100_bases AACTGGCCCAGAACGCAACACACCCAGTACATCCCCACTTCGATCGTCAAGCCGCCGCGACTTTGCCCGAGAGCGCCTGA TCCATCGCTGCCTGAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE PTEVVVLRILYAGRQFESDEG
Sequences:
>Translated_101_residues MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE PTEVVVLRILYAGRQFESDEG >Mature_101_residues MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHVRPGLRIVGFESRVSVAFVVE PTEVVVLRILYAGRQFESDEG
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11452; Mature: 11452
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHV CCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPGLRIVGFESRVSVAFVVEPTEVVVLRILYAGRQFESDEG CCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRYSIRLTDEAELDLASIYSFVRKTSASSTVARDYVARIKTFVSGFETYPERGSIRDHV CCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPGLRIVGFESRVSVAFVVEPTEVVVLRILYAGRQFESDEG CCCEEEEEECCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA