| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249383
Identifier: 116249383
GI number: 116249383
Start: 788774
End: 789055
Strand: Reverse
Name: 116249383
Synonym: pRL120721
Alternate gene names: NA
Gene position: 789055-788774 (Counterclockwise)
Preceding gene: 116249387
Following gene: 116249382
Centisome position: 90.69
GC content: 57.45
Gene sequence:
>282_bases ATGCGTTCGACGCAACAGATGAGCATCACGTTGCCCGTGGAAATGGCGAAGCGCGTTAAACAGCGGGTGTCTAACGGTGA TTACGCCTCGGAGAGCGAAGTCATACGCGAGGGACTTCGGGCTTTGCAGGAACGCGAGAATGCCGTCGAGCATTGGCTGC GAACAGAAGTTGCGGCCACCTATGATGCCTACAAGGCCGATCCCACCAAGGCCAAGCCCCTCGATGAGGTCTGGAAGCGC CTCGAAGCGCGCATGGACGAAATCGATCGGGAAGAAGATTGA
Upstream 100 bases:
>100_bases CGCGCCGCCGGCAGACACCCTAAGAGTATGATTCCATCCTATCGGGAGTAGGATTTTATCCTATCGCGTGCTATAAACCT GCAAAATAGGAGTGTAATCG
Downstream 100 bases:
>100_bases TGAAGCGCTATAGTATCCGCCTTACTGATGAGGCGGAATTGGATTTGGCGAGCATCTATAGTTTCGTCCGCAAGACATCC GCATCTTCTACCGTCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antidote Protein; CopG/Arc/MetJ Family Addiction Module Antidote Protein; Transcriptional Regulator CopG/Arc/MetJ Family; CopG/Arc/MetJ Family Transcriptional Regulator; Plasmid Stabilisation Protein; Transcriptional Regulators CopG/Arc/MetJ Family; Antitoxin Of A xin/Antitoxin System
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MRSTQQMSITLPVEMAKRVKQRVSNGDYASESEVIREGLRALQERENAVEHWLRTEVAATYDAYKADPTKAKPLDEVWKR LEARMDEIDREED
Sequences:
>Translated_93_residues MRSTQQMSITLPVEMAKRVKQRVSNGDYASESEVIREGLRALQERENAVEHWLRTEVAATYDAYKADPTKAKPLDEVWKR LEARMDEIDREED >Mature_93_residues MRSTQQMSITLPVEMAKRVKQRVSNGDYASESEVIREGLRALQERENAVEHWLRTEVAATYDAYKADPTKAKPLDEVWKR LEARMDEIDREED
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10867; Mature: 10867
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTQQMSITLPVEMAKRVKQRVSNGDYASESEVIREGLRALQERENAVEHWLRTEVAAT CCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDAYKADPTKAKPLDEVWKRLEARMDEIDREED HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSTQQMSITLPVEMAKRVKQRVSNGDYASESEVIREGLRALQERENAVEHWLRTEVAAT CCCCCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YDAYKADPTKAKPLDEVWKRLEARMDEIDREED HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA