| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249313
Identifier: 116249313
GI number: 116249313
Start: 703216
End: 703719
Strand: Reverse
Name: 116249313
Synonym: pRL120650
Alternate gene names: NA
Gene position: 703719-703216 (Counterclockwise)
Preceding gene: 116249318
Following gene: 116249312
Centisome position: 80.89
GC content: 58.33
Gene sequence:
>504_bases ATGACTTCCTGCCGAGGGCAATCCCCCGTTCATTCTGCCCATGTCGGCGACGAAGTCGAAGTCCATTATCGCTGGCATCC GTATTTCGGCCAAAAGGTGTCTGTTCGGCGCGTCGAAGAACGAGCGACAGGTCGGTTTTTGAAGGTTTTGGGACCGACAG GTGTCGTGATCGCGATTTCGGGGTGGATGATAGATCCTGTGGTGTGCAGCGGCATGACCATGGGAACGGCACGCGTCGAT CTTGCGGCGCTGATCGAACTGAACAGACTGGTCTCAGGCGGTGCGAAGGCGGCACTCTTCCGAGGTGAACATAGAATCAC TCAGGAGGAAGATGATGAGATCCCGCAACACGCTGGTGCCGGCGTCGGGCCGGCAGCTCGACCTGATATTCAAAACCCGC ACGCTCGACGGACTGAGCGACAAGGATCGCAAGAAGGCGATATCAACACTGGCTTGCCTGCTGATGCAGGCGGCCGGTCT GGCCGTCGAGGAGCTCAACGATGA
Upstream 100 bases:
>100_bases AGCCATGCCTGCGGATCGATGTCGTTGAGCTTGGCCGTCATGATCAGCGTGGCCATGAAGGCGGCGCGGTCAGCGCCGCG ATCCGATCCGGCGAAGAGCC
Downstream 100 bases:
>100_bases TCAGCACTGATCTGATTCCGACAGTGCTGCTTGAACGCAAGGCCGTCGTTTACGTTCGGCAGTCCACTCAGTCACAGGTG ATGACCAATCTGGAAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTSCRGQSPVHSAHVGDEVEVHYRWHPYFGQKVSVRRVEERATGRFLKVLGPTGVVIAISGWMIDPVVCSGMTMGTARVD LAALIELNRLVSGGAKAALFRGEHRITQEEDDEIPQHAGAGVGPAARPDIQNPHARRTERQGSQEGDINTGLPADAGGRS GRRGAQR
Sequences:
>Translated_167_residues MTSCRGQSPVHSAHVGDEVEVHYRWHPYFGQKVSVRRVEERATGRFLKVLGPTGVVIAISGWMIDPVVCSGMTMGTARVD LAALIELNRLVSGGAKAALFRGEHRITQEEDDEIPQHAGAGVGPAARPDIQNPHARRTERQGSQEGDINTGLPADAGGRS GRRGAQR >Mature_166_residues TSCRGQSPVHSAHVGDEVEVHYRWHPYFGQKVSVRRVEERATGRFLKVLGPTGVVIAISGWMIDPVVCSGMTMGTARVDL AALIELNRLVSGGAKAALFRGEHRITQEEDDEIPQHAGAGVGPAARPDIQNPHARRTERQGSQEGDINTGLPADAGGRSG RRGAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17981; Mature: 17850
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCRGQSPVHSAHVGDEVEVHYRWHPYFGQKVSVRRVEERATGRFLKVLGPTGVVIAIS CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCCEEEEEE GWMIDPVVCSGMTMGTARVDLAALIELNRLVSGGAKAALFRGEHRITQEEDDEIPQHAGA CCEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHCCC GVGPAARPDIQNPHARRTERQGSQEGDINTGLPADAGGRSGRRGAQR CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSCRGQSPVHSAHVGDEVEVHYRWHPYFGQKVSVRRVEERATGRFLKVLGPTGVVIAIS CCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHCCEEEEECCCCEEEEEE GWMIDPVVCSGMTMGTARVDLAALIELNRLVSGGAKAALFRGEHRITQEEDDEIPQHAGA CCEECHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHCCC GVGPAARPDIQNPHARRTERQGSQEGDINTGLPADAGGRSGRRGAQR CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA