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The map label for this gene is 116249312

Identifier: 116249312

GI number: 116249312

Start: 701150

End: 703219

Strand: Reverse

Name: 116249312

Synonym: pRL120649

Alternate gene names: NA

Gene position: 703219-701150 (Counterclockwise)

Preceding gene: 116249313

Following gene: 116249309

Centisome position: 80.83

GC content: 58.99

Gene sequence:

>2070_bases
ATGATCAGCACTGATCTGATTCCGACAGTGCTGCTTGAACGCAAGGCCGTCGTTTACGTTCGGCAGTCCACTCAGTCACA
GGTGATGACCAATCTGGAAAGCCAGCGACGGCAGTATGACCTTGTTGACGTCGCACGACAGCGCGGCTTTCTCGACGTTG
AGGTCATCGACGATGACCTCGGACGCTCCGCCAGCGGAACGGTCGCGCGCCCCGGCTTCGATCGTCTCGTCGCCCTGCTG
TGCGCCGGCAAAGTTGGTGCCGTTTTATGCTTCGACGCCTCACGGCTCGCACGTAACGGCCGCGACTGGCACCATCTGCT
CGAACTATGTGGCCTCGTTGAAGCCCGCGTCATAGATCACGATGGTGTCTACAATCCATGTCGGCCCAATGATCGTCTGC
TGCTGGGGATGAAGGGCAGTATCAGCGAGTTCGAACTTGGCGTGCTGAGAGCCCGCATGCTCGATGCCGCCAGATCGAAA
GCGCGCCGTGGCGAATTGCGACTTTCCGTTCCGTTCGGCTACATTTGGCATCGGGAGGCGGGGCTTGGACTGGACCCCGA
TCTGCGTCTGCAAGACGTAATCCGATCTATATTCGCACGCTTCCACGAGCTTGGAAGCGCGCGTCAGGTGCTGCTGTCGA
TGACGAAAGATCAAATCCACTTTCCGCGGCCTTCGGATGAAAGGCGCATGACCAACTTCGTCTGGACGCCGGTCCGTTAT
CGCAATGTAATCGGCATCCTCAAAAACCCCTTCTACGCCGGCGTCTACGTCTATGGGAAGAGCGAGAAGCGGACTGCCAT
CGTTGATGGACGAGCGCGTCGCAGCTATGGGCATGGCAAGCCTGTCGGCACCTGGGAGGTGATGATCCGGGATCATCACG
AAGGTTACATCAGTTGGGACGAGTACGAGCGCAACCAACAGCAATTGGCGCTCAATAATTATGGCCGCTCGGGCGGGACT
AAATCGGGCCGTGGCGGCAAAGCGTTATTATCGGGACTCCTGACCTGCGGACGGTGTGGGCGGCGGCTGAGTGTTGCTTA
TACGGGCAATCCACACAATCCTGTCTATCGCTGCGACAAGCAGAATCTAATGATGGGCTTGCCCCGGTGCATGACGTTCG
GTGGCCCGAAGGTCGATGCGGCGGTTGCGCGCGAGTTGTTGCGCGCGGTAGAACCGTTAGCGATCGAAGCGACCTTTGAA
GCAGAGCGGATGCACCGGGAGCGGCAAGAAGACCAGCGGCACATTCACGACCTGGAGCTACAACAGGCTCGCTACGAGGC
CAGCCTGGCTGAGCGTCGCTATGCGGCATGCGATCCCGACAATCGTCTCATCGCCGCGCAGCTTGAGAAGAATTGGGAAA
CTGCATTACGCCGCGTGCGGGATCTGGAGGAGCGCAAGCCTGCCGACAGTCCTTCGACAATAGCGGTCGATCCAGGCACT
TTCGCGAACTTGGCCGACAATCTCTTAGCTGCCTGGGAGTCGCCCGATGTGACCATGCGCGTGCGCCAGCAACTGCTGCG
TACACTCATCGCCGACATTGTCGTTGATGTCGACGATGCGGTGCGTGACGTCGTGCTGACGATCCATTGGAAGGGCGGCC
AGCATTCGGAACTCAAGGTCCGTAAGCCTCAGACCGGTGAACACGGTTGTGCCACCACTGAGGATGCCCTGGCGGTGATG
CGCAGCATGGCTGGTCGCTGGTCCGATGAACATATCGCCGCGTCGCTGAATCGAATGGGCATGCCAACGGGGCAAGGAAA
AACCTGGACCGCCCATCGGGTCGCTTCTGTAAGGCGGGTACGTGCGATCCACGCGTACAAATCAGCCGACAAAGACGGCG
AATGGCTGACCATGACTGAGGCTGCGGCGGCATTAGGCGTAACTAACCATCGAATACGCCATCTGATAAAGATGAAGGTG
TTGTCCGCCGAACAGGTGGTTCGCGGTGCGCCGTATCAAATCAGGGTCAGCGACCTGGCTTCTGCGACGGTCCAAGCCGC
GATAGCCCTGAAGGGCCGCCCGTGTCGCATTGCTGACACGGAGACGCTTCCAATGTTTACAGATACTTAG

Upstream 100 bases:

>100_bases
ACGCTCGACGGACTGAGCGACAAGGATCGCAAGAAGGCGATATCAACACTGGCTTGCCTGCTGATGCAGGCGGCCGGTCT
GGCCGTCGAGGAGCTCAACG

Downstream 100 bases:

>100_bases
AGAAGGAGCGCACAATGACTCAGGTCCGGCGAAGCCTCGCAACACTCGCTCGGCAGCATTGTTCGTGAGGCAGATCCTGC
CGTCTTCCAAGAATGACGCG

Product: putative insertion sequence/recombinase/resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 689; Mature: 689

Protein sequence:

>689_residues
MISTDLIPTVLLERKAVVYVRQSTQSQVMTNLESQRRQYDLVDVARQRGFLDVEVIDDDLGRSASGTVARPGFDRLVALL
CAGKVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDHDGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSK
ARRGELRLSVPFGYIWHREAGLGLDPDLRLQDVIRSIFARFHELGSARQVLLSMTKDQIHFPRPSDERRMTNFVWTPVRY
RNVIGILKNPFYAGVYVYGKSEKRTAIVDGRARRSYGHGKPVGTWEVMIRDHHEGYISWDEYERNQQQLALNNYGRSGGT
KSGRGGKALLSGLLTCGRCGRRLSVAYTGNPHNPVYRCDKQNLMMGLPRCMTFGGPKVDAAVARELLRAVEPLAIEATFE
AERMHRERQEDQRHIHDLELQQARYEASLAERRYAACDPDNRLIAAQLEKNWETALRRVRDLEERKPADSPSTIAVDPGT
FANLADNLLAAWESPDVTMRVRQQLLRTLIADIVVDVDDAVRDVVLTIHWKGGQHSELKVRKPQTGEHGCATTEDALAVM
RSMAGRWSDEHIAASLNRMGMPTGQGKTWTAHRVASVRRVRAIHAYKSADKDGEWLTMTEAAAALGVTNHRIRHLIKMKV
LSAEQVVRGAPYQIRVSDLASATVQAAIALKGRPCRIADTETLPMFTDT

Sequences:

>Translated_689_residues
MISTDLIPTVLLERKAVVYVRQSTQSQVMTNLESQRRQYDLVDVARQRGFLDVEVIDDDLGRSASGTVARPGFDRLVALL
CAGKVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDHDGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSK
ARRGELRLSVPFGYIWHREAGLGLDPDLRLQDVIRSIFARFHELGSARQVLLSMTKDQIHFPRPSDERRMTNFVWTPVRY
RNVIGILKNPFYAGVYVYGKSEKRTAIVDGRARRSYGHGKPVGTWEVMIRDHHEGYISWDEYERNQQQLALNNYGRSGGT
KSGRGGKALLSGLLTCGRCGRRLSVAYTGNPHNPVYRCDKQNLMMGLPRCMTFGGPKVDAAVARELLRAVEPLAIEATFE
AERMHRERQEDQRHIHDLELQQARYEASLAERRYAACDPDNRLIAAQLEKNWETALRRVRDLEERKPADSPSTIAVDPGT
FANLADNLLAAWESPDVTMRVRQQLLRTLIADIVVDVDDAVRDVVLTIHWKGGQHSELKVRKPQTGEHGCATTEDALAVM
RSMAGRWSDEHIAASLNRMGMPTGQGKTWTAHRVASVRRVRAIHAYKSADKDGEWLTMTEAAAALGVTNHRIRHLIKMKV
LSAEQVVRGAPYQIRVSDLASATVQAAIALKGRPCRIADTETLPMFTDT
>Mature_689_residues
MISTDLIPTVLLERKAVVYVRQSTQSQVMTNLESQRRQYDLVDVARQRGFLDVEVIDDDLGRSASGTVARPGFDRLVALL
CAGKVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDHDGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSK
ARRGELRLSVPFGYIWHREAGLGLDPDLRLQDVIRSIFARFHELGSARQVLLSMTKDQIHFPRPSDERRMTNFVWTPVRY
RNVIGILKNPFYAGVYVYGKSEKRTAIVDGRARRSYGHGKPVGTWEVMIRDHHEGYISWDEYERNQQQLALNNYGRSGGT
KSGRGGKALLSGLLTCGRCGRRLSVAYTGNPHNPVYRCDKQNLMMGLPRCMTFGGPKVDAAVARELLRAVEPLAIEATFE
AERMHRERQEDQRHIHDLELQQARYEASLAERRYAACDPDNRLIAAQLEKNWETALRRVRDLEERKPADSPSTIAVDPGT
FANLADNLLAAWESPDVTMRVRQQLLRTLIADIVVDVDDAVRDVVLTIHWKGGQHSELKVRKPQTGEHGCATTEDALAVM
RSMAGRWSDEHIAASLNRMGMPTGQGKTWTAHRVASVRRVRAIHAYKSADKDGEWLTMTEAAAALGVTNHRIRHLIKMKV
LSAEQVVRGAPYQIRVSDLASATVQAAIALKGRPCRIADTETLPMFTDT

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 77375; Mature: 77375

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTDLIPTVLLERKAVVYVRQSTQSQVMTNLESQRRQYDLVDVARQRGFLDVEVIDDDL
CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GRSASGTVARPGFDRLVALLCAGKVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDH
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHEEECC
DGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSKARRGELRLSVPFGYIWHREA
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECC
GLGLDPDLRLQDVIRSIFARFHELGSARQVLLSMTKDQIHFPRPSDERRMTNFVWTPVRY
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCHHH
RNVIGILKNPFYAGVYVYGKSEKRTAIVDGRARRSYGHGKPVGTWEVMIRDHHEGYISWD
HHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCCCCEEEEEEEECCCCCEEHH
EYERNQQQLALNNYGRSGGTKSGRGGKALLSGLLTCGRCGRRLSVAYTGNPHNPVYRCDK
HHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECC
QNLMMGLPRCMTFGGPKVDAAVARELLRAVEPLAIEATFEAERMHRERQEDQRHIHDLEL
HHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QQARYEASLAERRYAACDPDNRLIAAQLEKNWETALRRVRDLEERKPADSPSTIAVDPGT
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC
FANLADNLLAAWESPDVTMRVRQQLLRTLIADIVVDVDDAVRDVVLTIHWKGGQHSELKV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEEECCCCCCCEEE
RKPQTGEHGCATTEDALAVMRSMAGRWSDEHIAASLNRMGMPTGQGKTWTAHRVASVRRV
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RAIHAYKSADKDGEWLTMTEAAAALGVTNHRIRHLIKMKVLSAEQVVRGAPYQIRVSDLA
HHHHHHHCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
SATVQAAIALKGRPCRIADTETLPMFTDT
HHHHHHHEEECCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MISTDLIPTVLLERKAVVYVRQSTQSQVMTNLESQRRQYDLVDVARQRGFLDVEVIDDDL
CCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GRSASGTVARPGFDRLVALLCAGKVGAVLCFDASRLARNGRDWHHLLELCGLVEARVIDH
CCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHEEECC
DGVYNPCRPNDRLLLGMKGSISEFELGVLRARMLDAARSKARRGELRLSVPFGYIWHREA
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECC
GLGLDPDLRLQDVIRSIFARFHELGSARQVLLSMTKDQIHFPRPSDERRMTNFVWTPVRY
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCHHH
RNVIGILKNPFYAGVYVYGKSEKRTAIVDGRARRSYGHGKPVGTWEVMIRDHHEGYISWD
HHHHHHHCCCCEEEEEEEECCCCCEEEECCCHHHCCCCCCCCCEEEEEEEECCCCCEEHH
EYERNQQQLALNNYGRSGGTKSGRGGKALLSGLLTCGRCGRRLSVAYTGNPHNPVYRCDK
HHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECC
QNLMMGLPRCMTFGGPKVDAAVARELLRAVEPLAIEATFEAERMHRERQEDQRHIHDLEL
HHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
QQARYEASLAERRYAACDPDNRLIAAQLEKNWETALRRVRDLEERKPADSPSTIAVDPGT
HHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCC
FANLADNLLAAWESPDVTMRVRQQLLRTLIADIVVDVDDAVRDVVLTIHWKGGQHSELKV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCEEEEEEEECCCCCCCEEE
RKPQTGEHGCATTEDALAVMRSMAGRWSDEHIAASLNRMGMPTGQGKTWTAHRVASVRRV
ECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
RAIHAYKSADKDGEWLTMTEAAAALGVTNHRIRHLIKMKVLSAEQVVRGAPYQIRVSDLA
HHHHHHHCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHH
SATVQAAIALKGRPCRIADTETLPMFTDT
HHHHHHHEEECCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]