| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249262
Identifier: 116249262
GI number: 116249262
Start: 648851
End: 649264
Strand: Direct
Name: 116249262
Synonym: pRL120597
Alternate gene names: NA
Gene position: 648851-649264 (Clockwise)
Preceding gene: 116249261
Following gene: 116249263
Centisome position: 74.58
GC content: 61.35
Gene sequence:
>414_bases ATGGTAAAGGACAAGTACTTCATCTATCCGAAGGATGTGAGCGCCTTCGGCTTCGACTGGGGCAAGCTGTCGCTGACTGT GGCGCCCGAGGTCAACGGCGCCAGCCGGTTTTCCGGCGGTGTCGTCGAACTGCCGAGCGGCGAGGGCCATTCCCGCCACA ATCATCCTGGCGCGGAGGAAATCATTTTTGTGATTTCCGGCGAGGGCGAGCAGATGGTCGAGGACGAGACGGGTAATCCG ATCACGCGGAAGGTCGCCAGCGGCTGCACGATATATGTTCCGGAAAGCCGCTTTCATTCGACGAAGAACACCGGCGACGG GCAGATGCTCCTCTTCGTGGTCTACTCACCGGCGGGGCCGGAGCTTGCGCTTCGCGATTTGCCGGACTTCCGCCTGCTGC CGCCAGGCTTCTGA
Upstream 100 bases:
>100_bases CGCCTGCCGGCAGAGGCGGCAATCCGCAAGCAGACGGAAGATTTCAAGGCGCTCGCGATCGGCGCGGTCGTCTGAGGAAG GATGTGGAGGAGGCGGTTTC
Downstream 100 bases:
>100_bases GGCGACGCATCCATTTTCTGGGAGGAAAGACAATGAACGACAATGCAGGGCAAACAAGGCAGGCCGCCGTGACGCCGTTC GATACGGCCAAGCTCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVKDKYFIYPKDVSAFGFDWGKLSLTVAPEVNGASRFSGGVVELPSGEGHSRHNHPGAEEIIFVISGEGEQMVEDETGNP ITRKVASGCTIYVPESRFHSTKNTGDGQMLLFVVYSPAGPELALRDLPDFRLLPPGF
Sequences:
>Translated_137_residues MVKDKYFIYPKDVSAFGFDWGKLSLTVAPEVNGASRFSGGVVELPSGEGHSRHNHPGAEEIIFVISGEGEQMVEDETGNP ITRKVASGCTIYVPESRFHSTKNTGDGQMLLFVVYSPAGPELALRDLPDFRLLPPGF >Mature_137_residues MVKDKYFIYPKDVSAFGFDWGKLSLTVAPEVNGASRFSGGVVELPSGEGHSRHNHPGAEEIIFVISGEGEQMVEDETGNP ITRKVASGCTIYVPESRFHSTKNTGDGQMLLFVVYSPAGPELALRDLPDFRLLPPGF
Specific function: Unknown
COG id: COG2140
COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14915; Mature: 14915
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKDKYFIYPKDVSAFGFDWGKLSLTVAPEVNGASRFSGGVVELPSGEGHSRHNHPGAEE CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC IIFVISGEGEQMVEDETGNPITRKVASGCTIYVPESRFHSTKNTGDGQMLLFVVYSPAGP EEEEEECCCCEEECCCCCCHHHHHHHCCEEEEEECHHCCCCCCCCCCCEEEEEEECCCCC ELALRDLPDFRLLPPGF CEEEECCCCCEECCCCC >Mature Secondary Structure MVKDKYFIYPKDVSAFGFDWGKLSLTVAPEVNGASRFSGGVVELPSGEGHSRHNHPGAEE CCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC IIFVISGEGEQMVEDETGNPITRKVASGCTIYVPESRFHSTKNTGDGQMLLFVVYSPAGP EEEEEECCCCEEECCCCCCHHHHHHHCCEEEEEECHHCCCCCCCCCCCEEEEEEECCCCC ELALRDLPDFRLLPPGF CEEEECCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA