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The map label for this gene is traG [H]

Identifier: 116249230

GI number: 116249230

Start: 616570

End: 618258

Strand: Reverse

Name: traG [H]

Synonym: pRL120565

Alternate gene names: 116249230

Gene position: 618258-616570 (Counterclockwise)

Preceding gene: 116249231

Following gene: 116249229

Centisome position: 71.06

GC content: 61.28

Gene sequence:

>1689_bases
ATGATGATCCATGCCAGCCAGATCAAGATTGCCTTCGCAAACATGATGCACATGGCGGCCCGCGATCCGCTCTGGGCCAT
CGTCGCGTTCATCAGCTTTCCGCTTCGATATGCCAGGTCGTTCCTGAAGGGTGCGGTCGGCTATGTCATCGTCATCGTTA
CCGTCTACTTCGGGATCGACTACCTCAGACGCGTGATCCTTGGCAGCAGCAGAGGTGACGTCATCTGGCATATCGGCGAT
TGGATATTCATGCTTTTTGCCGTCGTGCTGCTTATCCGGTTTTTGTCCGAGCCGCTGATCACGCATTTCGCGACAGCGAG
CGACGCCGACACGCATGGGTCGGCGCGCTTTGCCGGCCGAAGAGAGATTGCGCCTCTGACAAAGGCAGAAGGCGGATTGC
TGATCGGCCGTGCGAACAACTCCGGCCGGCTTCTTCGCTATAGCGGACCGGCTCATCTGCTCACCATGGCGCCGACGCGC
AGCGGCAAGGGTGTCGGCACCATCATCCCGAACCTCTTGACAGCCGATCGCTCGATCATCTGCATCGATCCGAAAGGCGA
GAATGCGAAGATCGCCGGTGAGGCACGAGAGAAGTTCGGGCCGGTTCATATCCTCGATCCGTTCGGCGTCACCGGCGGAC
CTTCGGCTGCCTTCAATCCGATGGACGGCGTTGATAAAGACAGCGTCGATGTCGCCGAAGACGTCTCCACCTTGGCCGAC
GCACTGGTGTTCGACGAACCCGGTCTTTCGGGGGACGCCCATTGGAACGAGGAAGCCAAGGCGCTGATCGCGGGATTGCT
GCTGCATGTGATCGCCAGCCAGTCGGACGACAGGCGCACGCTGACCACGCTCAGGCATTTGCTGACGCTGGCGCCAGAAG
CGTTCCGTGCCGTGCTGGACGCAATGCAGGACAGTGACGCGGTGAACGGCTTGGTCGCCCGTGCCGCCAACCGCCATCTC
GGCAAGTCGGATCGCGAAGCCAGCGGCGTGCTGTCGGCGGCCCAGCGACATACGCATTTCCTCGACAGTCCGCGCATGAC
CGAGGTGCTGTCACGATCGGATTTTCGGTTCGGTGACCTCAAGGCAGACAAGGCGACCGTGTTTCTGGTCTTGCCGCCAG
ACAGGCTTGCGGCCTATTCGCGTTGGCTGCGTTTGCTGGTGGCCCAGAGCCTGACCGAGATGGCGCGGACCGCACCCTCG
CCGCATCCATCCGCGCCGCCTGTTCTCTACCTTCTCGACGAGTTTGCCGCCCTTGGTCATCTGGCGCCGATCGAACGCGC
CATGGGATTGATGGCAGGCTACGGTGTGCAACTCTGGCCAATCGTCCAGGACATTCATCAGCTGCGCGCCACCTATCGCC
AGCGCGCCGGCACGTTTCTGTCCAACGCCGGCGTGCTGCAAGTGTTCGGGGTCAATGATCACGACAGCGCCCGTCTGGTC
TCCGATCTGCTTGGCCAGGAGACCGTGGTGTTCAACACGGCGGCCCGTGCACTCGATTCGGAAAAGAGCGGCCTCTCCTT
TGCCGAGCAGCATGTCGGCCGCCCGCTGCTGACGCCCGACGAAGTCCGCAATATGCATGCCGAGACCGAGCTGCTGTTCA
TCGCCGGCCAGCGGCCGATCGTTGCGACAAAGTTGCGATATTATGCCGATCCGGAATTTTCCGGATTGTTCACTGCATCA
CAGATCTGA

Upstream 100 bases:

>100_bases
AATTCCTCACCCGCGATGGCGATCGGGATCTGTTCGACGATCTGCTGAAGCCGCAGGCAAATGAGCCGACTATCGGCAAT
ATCGGCAGTGGGAGTGCGGT

Downstream 100 bases:

>100_bases
CGAGGCGACATCACCAACGTGAATCGATCGGGCCTCATCGATTCACAAATGTCGTTGGACGCCGCCGCCTGGTCTTTGCG
ATTCTGCCGGCATGACACGA

Product: putative transmembrane traG homologue/component of type IV secretion system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGIDYLRRVILGSSRGDVIWHIGD
WIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGRREIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTR
SGKGVGTIIPNLLTADRSIICIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLDAMQDSDAVNGLVARAANRHL
GKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDLKADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPS
PHPSAPPVLYLLDEFAALGHLAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPIVATKLRYYADPEFSGLFTAS
QI

Sequences:

>Translated_562_residues
MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGIDYLRRVILGSSRGDVIWHIGD
WIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGRREIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTR
SGKGVGTIIPNLLTADRSIICIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLDAMQDSDAVNGLVARAANRHL
GKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDLKADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPS
PHPSAPPVLYLLDEFAALGHLAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPIVATKLRYYADPEFSGLFTAS
QI
>Mature_562_residues
MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGIDYLRRVILGSSRGDVIWHIGD
WIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGRREIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTR
SGKGVGTIIPNLLTADRSIICIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLDAMQDSDAVNGLVARAANRHL
GKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDLKADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPS
PHPSAPPVLYLLDEFAALGHLAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPIVATKLRYYADPEFSGLFTAS
QI

Specific function: Required for conjugative transfer of plasmid R751. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 61209; Mature: 61209

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGID
CEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLRRVILGSSRGDVIWHIGDWIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGR
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
REIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTRSGKGVGTIIPNLLTADRSII
CCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEE
CIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
EECCCCCCCEECCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHH
AMQDSDAVNGLVARAANRHLGKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDL
HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
KADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPSPHPSAPPVLYLLDEFAALGH
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
LAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCHHHHH
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPI
HHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCE
VATKLRYYADPEFSGLFTASQI
EEHHHHHHCCCCCCCCEECCCC
>Mature Secondary Structure
MMIHASQIKIAFANMMHMAARDPLWAIVAFISFPLRYARSFLKGAVGYVIVIVTVYFGID
CEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLRRVILGSSRGDVIWHIGDWIFMLFAVVLLIRFLSEPLITHFATASDADTHGSARFAGR
HHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
REIAPLTKAEGGLLIGRANNSGRLLRYSGPAHLLTMAPTRSGKGVGTIIPNLLTADRSII
CCCCCCCCCCCCEEEEECCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEE
CIDPKGENAKIAGEAREKFGPVHILDPFGVTGGPSAAFNPMDGVDKDSVDVAEDVSTLAD
EECCCCCCCEECCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ALVFDEPGLSGDAHWNEEAKALIAGLLLHVIASQSDDRRTLTTLRHLLTLAPEAFRAVLD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHH
AMQDSDAVNGLVARAANRHLGKSDREASGVLSAAQRHTHFLDSPRMTEVLSRSDFRFGDL
HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
KADKATVFLVLPPDRLAAYSRWLRLLVAQSLTEMARTAPSPHPSAPPVLYLLDEFAALGH
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
LAPIERAMGLMAGYGVQLWPIVQDIHQLRATYRQRAGTFLSNAGVLQVFGVNDHDSARLV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCHHHHH
SDLLGQETVVFNTAARALDSEKSGLSFAEQHVGRPLLTPDEVRNMHAETELLFIAGQRPI
HHHHCCCEEEEHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCE
VATKLRYYADPEFSGLFTASQI
EEHHHHHHCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997 [H]