| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is mobC
Identifier: 116249231
GI number: 116249231
Start: 618255
End: 618587
Strand: Reverse
Name: mobC
Synonym: pRL120566
Alternate gene names: NA
Gene position: 618587-618255 (Counterclockwise)
Preceding gene: 116249234
Following gene: 116249230
Centisome position: 71.1
GC content: 60.66
Gene sequence:
>333_bases ATGGGAACAAGGGAGAAGATCATCATGGCACGCAAAACCATCGGCGAACGGCTCGCCCAGCTGGAGGCGCAGCGCAAGAC ATTGCAGATCCGTCTCGGCAAGCAGGAGCGCGCCATCGATACGCGCCGCAAGGTGCTGATCGGCGCCCTGGTGCTGCATC GGCTTGCGAATGACCGCGACGTTCACATCGGCGGAGGACTGGCAGCCTGGCTCAGATCCGAACTGCCAAAATTCCTCACC CGCGATGGCGATCGGGATCTGTTCGACGATCTGCTGAAGCCGCAGGCAAATGAGCCGACTATCGGCAATATCGGCAGTGG GAGTGCGGTATGA
Upstream 100 bases:
>100_bases CAGATTTGCGGGTTTCGAAAGGCCGCTCGTCGAGACAACCTCGATCGAGGCACGCCGGCAGCGGAGACACCCTCCGTTCA TTGCCGCGGCCAATGGCTCA
Downstream 100 bases:
>100_bases TGATCCATGCCAGCCAGATCAAGATTGCCTTCGCAAACATGATGCACATGGCGGCCCGCGATCCGCTCTGGGCCATCGTC GCGTTCATCAGCTTTCCGCT
Product: putative mobilization protein C
Products: NA
Alternate protein names: Mobilization Protein
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MGTREKIIMARKTIGERLAQLEAQRKTLQIRLGKQERAIDTRRKVLIGALVLHRLANDRDVHIGGGLAAWLRSELPKFLT RDGDRDLFDDLLKPQANEPTIGNIGSGSAV
Sequences:
>Translated_110_residues MGTREKIIMARKTIGERLAQLEAQRKTLQIRLGKQERAIDTRRKVLIGALVLHRLANDRDVHIGGGLAAWLRSELPKFLT RDGDRDLFDDLLKPQANEPTIGNIGSGSAV >Mature_109_residues GTREKIIMARKTIGERLAQLEAQRKTLQIRLGKQERAIDTRRKVLIGALVLHRLANDRDVHIGGGLAAWLRSELPKFLTR DGDRDLFDDLLKPQANEPTIGNIGSGSAV
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12251; Mature: 12120
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTREKIIMARKTIGERLAQLEAQRKTLQIRLGKQERAIDTRRKVLIGALVLHRLANDRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VHIGGGLAAWLRSELPKFLTRDGDRDLFDDLLKPQANEPTIGNIGSGSAV EEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTREKIIMARKTIGERLAQLEAQRKTLQIRLGKQERAIDTRRKVLIGALVLHRLANDRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC VHIGGGLAAWLRSELPKFLTRDGDRDLFDDLLKPQANEPTIGNIGSGSAV EEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA