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The map label for this gene is impB

Identifier: 116249139

GI number: 116249139

Start: 513343

End: 513888

Strand: Reverse

Name: impB

Synonym: pRL120474

Alternate gene names: NA

Gene position: 513888-513343 (Counterclockwise)

Preceding gene: 116249140

Following gene: 116249138

Centisome position: 59.07

GC content: 60.07

Gene sequence:

>546_bases
ATGAGACGAAGAAGAATCTCGATGGCAAGTGTGCATGAGAAACTGGAACGGGTTCGCAAACCGCGAGTCCACATCAAATA
CGAAGTGGAAACCGAAGGCGCGATGGTGGTGAAGGAACTGCCCTTCGTCGTCGGCGTACTCGGCGACTTCTCCGGAAATC
CCACGCAGCAGCTCAAGCCTTTCGGCGAGCGCAAGTTCGTGCAGGTCGACCGCGACAACTTCGACGACGTCATGCGCCGC
ATGACGCCGGGCCTCACCCTGTCGGTCGAGAACACTCTCGAGAAGAACGGAACAGAGCTTCCCGTTTCGCTGAAATTCGA
AAGCATGGCCGATTTCGAACCCGGCGCGGTCGTCGATCAGGTGCCGGCGCTGAAGGCCCTGCTCAACGCGCGCAACCAGC
TGCGCGACCTGATGAGCAAGGCGGACCGCTCCGAAGAGCTCGAGCGCCTGCTCGAGGATATCCTGCAGAACAAGGCCGAT
CTCTCGCAGCTGGTGGCCCAGCTTGGCGGCGACAAAGCCGAAGAGGCGAAGGACGCATTGAACTGA

Upstream 100 bases:

>100_bases
GCAGACGCGCAACGCGGTGCTGACGGCAGCCGGCATCCAGCCCGTAGCCGACAAGGGAGGCTAACGGCACGCCGCAGCAT
CCTCAATTGACAATCCGCCG

Downstream 100 bases:

>100_bases
GTGCCTGGGATCGCGGACCGATCGCGGCCCGCGCGCTCCATTCCTGAAGAGTCGTTGTCCGGCAGCGGCCCCTTTTGAAG
GGAACCCCTCATGCTTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRRRRISMASVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQQLKPFGERKFVQVDRDNFDDVMRR
MTPGLTLSVENTLEKNGTELPVSLKFESMADFEPGAVVDQVPALKALLNARNQLRDLMSKADRSEELERLLEDILQNKAD
LSQLVAQLGGDKAEEAKDALN

Sequences:

>Translated_181_residues
MRRRRISMASVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQQLKPFGERKFVQVDRDNFDDVMRR
MTPGLTLSVENTLEKNGTELPVSLKFESMADFEPGAVVDQVPALKALLNARNQLRDLMSKADRSEELERLLEDILQNKAD
LSQLVAQLGGDKAEEAKDALN
>Mature_181_residues
MRRRRISMASVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQQLKPFGERKFVQVDRDNFDDVMRR
MTPGLTLSVENTLEKNGTELPVSLKFESMADFEPGAVVDQVPALKALLNARNQLRDLMSKADRSEELERLLEDILQNKAD
LSQLVAQLGGDKAEEAKDALN

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20447; Mature: 20447

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRISMASVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQQLKP
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC
FGERKFVQVDRDNFDDVMRRMTPGLTLSVENTLEKNGTELPVSLKFESMADFEPGAVVDQ
CCCCCEEEECCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCEEEEEHHHCCCCCCCHHHH
VPALKALLNARNQLRDLMSKADRSEELERLLEDILQNKADLSQLVAQLGGDKAEEAKDAL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCC
N
C
>Mature Secondary Structure
MRRRRISMASVHEKLERVRKPRVHIKYEVETEGAMVVKELPFVVGVLGDFSGNPTQQLKP
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCC
FGERKFVQVDRDNFDDVMRRMTPGLTLSVENTLEKNGTELPVSLKFESMADFEPGAVVDQ
CCCCCEEEECCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCEEEEEHHHCCCCCCCHHHH
VPALKALLNARNQLRDLMSKADRSEELERLLEDILQNKADLSQLVAQLGGDKAEEAKDAL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA